Hoc-A新型环境传感器的结构和功能,由T4和其他细菌菌体编码
Andrei Fokine1,2, Mohammad Zahidul Islam2,3, Qianglin Fang1,4
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Viruses
|July 29, 2023
概括
菌体 T4 的情况.
科学领域:
- 结构生物学是结构生物学.
- 病毒学 病毒学
- 生物化学 生物化学
背景情况:
- 菌体T4利用高度抗原的外囊蛋白 (Hoc) 纤维用于结构装饰.
- 霍克纤维大约长155-180英里,对于菌体与宿主相互作用至关重要.
- 了解HOC的结构和功能是菌体生物学和潜在应用的关键.
研究的目的:
- 为了确定菌体T4 Hoc. 的近原子结构.
- 为了阐明Hoc与菌体囊的结合机制.
- 研究Hoc在菌体行为和生态持久性中的作用.
主要方法:
- 电子显微镜 (cryo-EM) 用于高分辨率成像.
- 用于计算建模的AlphaFold结构预测.
- 生物化学分析以评估pH依赖性质.
主要成果:
- 生成了Hoc的近原子结构模型,揭示了保留的C端囊结合域和三个可变的免疫球蛋白样域.
- 霍克纤维附着在具有特定方向偏好的gp23*六合体上,与所有六个子单位相互作用.
- 霍克表现出依赖pH的聚类和分散,这表明它在菌体导航和生存中的作用.
结论:
- 该研究提供了细致的结构和功能理解的菌体T4 Hoc.
- 霍克作为pH值敏感装置,使菌体能够在不同的环境中移动和持久.
- 这项研究提供了对菌体与宿主相互作用以及潜在的生物技术应用的见解.
相关概念视频
DNA Bacteriophages
52
Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
52
Viral Replication: Lytic Cycle
73
Bacteriophages, or phages, are viruses that specifically infect bacteria. Among them, T-even bacteriophages, such as T4, exhibit a well-characterized lytic replication cycle in Escherichia coli (E. coli). This process ensures the rapid proliferation of the virus while ultimately leading to the destruction of the bacterial host.Attachment and DNA InjectionThe infection process begins with the recognition and binding of the T4 phage to the E. coli cell surface. Tail fibers of the phage...
73
Lytic Cycle of Bacteriophages
70.9K
Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the...
70.9K
Transduction
42
Among the three main modes of HGT—transformation, conjugation, and transduction—transduction is unique in that it is mediated by bacteriophages, or bacterial viruses.Transduction occurs in two ways. Generalized transduction occurs during the lytic cycle of a bacteriophage infection. In this process, bacteriophages infect bacterial cells, replicate within them, and ultimately cause cell lysis, releasing newly assembled virions. Occasionally, random fragments of the bacterial genome...
42
Hyperthermophilic Bacteria
36
Domain Bacteria includes some unique hyperthermophilic species. They exhibit remarkable adaptations that enable survival in extreme environments.Thermotoga species are rod-shaped, gram-negative, non-sporulating hyperthermophiles that form a sheath-like envelope called a toga. They ferment sugars or starch, producing lactate, acetate, CO₂, and H₂, and can also grow via anaerobic respiration using H₂ and ferric iron. Found in hot springs and hydrothermal vents, over 20% of their...
36
CRISPR and crRNAs
17.1K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
17.1K


