侵袭性红沼泽的基因组适应性潜力在寒冷的环境中
Daiki X Sato1,2,3, Yuki Matsuda3, Nisikawa Usio4
1Institute for Advanced Academic Research, Chiba University, Chiba 263-8522, Japan.
iScience
|July 31, 2023
概括
红色沼泽 (Procambarus clarkii) 在日本由于基因重复而表现出增强的寒冷耐受性. 蛋白酶抑制剂和皮膜发育中的这些遗传变化可能有助于它在较冷的淡水环境中生存.
科学领域:
- 生态学和进化生物学.
- 基因组学和转录基因组学
背景情况:
- 生物入侵是一个重大的生态挑战.
- 了解入侵物种成功的遗传基础至关重要.
- 红色沼泽 (Procambarus clarkii) 是一种全球入侵的淡水物种.
研究的目的:
- 在Procambarus clarkii.的入侵种群中调查寒冷适应的基因组和转录基因组基础.
- 确定特定的基因和遗传机制,有助于鱼殖民寒冷环境的能力.
主要方法:
- 对暴露在寒冷条件下的Procambarus clarkii种群进行了RNA测序 (RNA-seq) 分析.
- 进行了差异基因表达分析,以确定对寒冷应激反应的基因.
- 用比较基因组分析来研究基因家族扩展.
主要成果:
- RNA-seq揭示了与蛋白酶抑制剂相关的基因的显著差异性表达以及对寒冷的反应中的皮质发育.
- 基因家族分析表明,这些候选基因家族中存在着显著的重复.
- 重复基因的协同表达模式表明,功能放大用于适应寒冷.
结论:
- 这项研究为Procambarus clarkii的遗传特征提供了洞察力,这可能有助于寒冷适应.
- 基因重复和它们在蛋白酶抑制剂和皮膜发育途径中的协调表达是这种侵入性鱼增强寒冷耐受性的潜在机制.
相关概念视频
Background and Environment Affect Phenotype
6.6K
Although the genetic makeup of an organism plays a major role in determining the phenotype, there are also several environmental factors, such as temperature, oxygen availability, presence of mutagens, that can alter an organism’s phenotype.
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
6.6K
Responses to Heat and Cold Stress
13.6K
Every organism has an optimum temperature range within which healthy growth and physiological functioning can occur. At the ends of this range, there will be a minimum and maximum temperature that interrupt biological processes.
13.6K
Transduction
42
Among the three main modes of HGT—transformation, conjugation, and transduction—transduction is unique in that it is mediated by bacteriophages, or bacterial viruses.Transduction occurs in two ways. Generalized transduction occurs during the lytic cycle of a bacteriophage infection. In this process, bacteriophages infect bacterial cells, replicate within them, and ultimately cause cell lysis, releasing newly assembled virions. Occasionally, random fragments of the bacterial genome...
42
Factors Influencing Microbial Growth: Temperature
68
Microorganisms display remarkable adaptations, enabling them to thrive in diverse ecological niches across a wide range of temperatures. Temperature profoundly influences microbial growth by affecting enzymatic activity, membrane fluidity, and other cellular processes.Each microorganism operates within a specific temperature range defined by three cardinal points: minimum, optimum, and maximum. Below the minimum temperature, membranes lose fluidity, halting transport processes. Above the...
68
Diversity of Archaea III
32
Crenarchaeota, a prominent phylum of Archaea, is remarkable for its ability to thrive in extreme environments characterized by high temperatures and acidity. These microorganisms inhabit sulfuric hot springs, volcanic systems, and submarine hydrothermal vents, where temperatures often exceed 100°C. The unique adaptations of Crenarchaeota not only allow survival under such extreme conditions but also provide insights into the mechanisms of life in primordial Earth-like...
32
Adaptations that Reduce Water Loss
25.7K
Though evaporation from plant leaves drives transpiration, it also results in loss of water. Because water is critical for photosynthetic reactions and other cellular processes, evolutionary pressures on plants in different environments have driven the acquisition of adaptations that reduce water loss.
25.7K


