小分子药物设计的进步:结构视角
Ke Wu1, Eduard Karapetyan1, John Schloss2
1Division of Cancer Research and Training, Department of Internal Medicine, Charles R. Drew University of Medicine and Science, David Geffen UCLA School of Medicine and UCLA Jonsson Comprehensive Cancer Center, Los Angeles, CA 90095, USA.
Drug discovery today
|August 3, 2023
概括
本综述涵盖了小分子药物设计的结构方面,重点是蛋白质结构预测和带结合口袋. 整合结构数据可以提高新疗法药物发现的效率和安全性.
科学领域:
- 药用化学 医学化学
- 结构生物学 结构生物学
- 计算化学的计算化学
背景情况:
- 小分子药物是关键的治疗方法.
- 基于结构的药物设计 (SBDD) 是一个关键策略.
- 计算方法的进步正在改变SBDD.
研究的目的:
- 从结构的角度来看,回顾SBDD最近的进展.
- 突出结构特征和计算工具在优化候选药物的作用.
- 讨论在药物发现中整合结构信息的未来方向.
主要方法:
- 蛋白质结构预测方法的比较.
- 对连接体结合口袋特征的分析.
- 检查药物优化的结构特征 (功能组,立体化学,分子量).
- 讨论分子对接和虚拟选等计算工具.
主要成果:
- 结构视角对于小分子药物设计至关重要.
- 带结合口袋分析指导优化.
- 计算工具可以有效地预测和完善候选药物结构.
- 介绍了结构设计药物候选物的例子.
结论:
- 整合结构信息可以提高药物发现效率.
- 优化的候选药物表现出增强的疗效,特异性和安全性.
- 未来的研究应该专注于新疗法结构数据和其他数据的协同整合.
相关概念视频
Structure-Activity Relationships and Drug Design
770
Drug design is a dynamic field that involves discovering and developing new medications based on specific biological targets. This process heavily relies on structure-activity relationships (SAR) and quantitative structure-activity relationships (QSAR) to guide the design and optimization of efficient drugs.
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
770
Drug Discovery: Overview
8.1K
Drug discovery is a multifaceted process involving extensive screening, testing, and optimization of lead compounds to identify potential new drugs for therapeutic use. It combines several approaches, including screening large numbers of natural products, chemical modification of known active molecules, identification of new drug targets, and rational design based on biological mechanisms and drug-receptor structure. These approaches are carried out in both academic research laboratories and...
8.1K
Targets for Drug Action: Overview
6.4K
Drugs target macromolecules to modify ongoing cellular processes. Primary drug targets include receptors, ion channels, transporters, and enzymes.
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
6.4K
Principles of Drug Action
6.1K
Drugs are chemical substances that modify biological responses by interacting with macromolecular targets such as receptors, ion channels, transporters, and enzymes. Pharmacodynamics describes the course of action of drugs leading to the physiological effect at a specific site in the body.
Drugs can be agonists or antagonists. Like the endogenous ligands, agonists always bind and activate the target to produce a cellular response. Agonist binding induces a conformational change which in turn...
Drugs can be agonists or antagonists. Like the endogenous ligands, agonists always bind and activate the target to produce a cellular response. Agonist binding induces a conformational change which in turn...
6.1K
Drug-Receptor Bonds
2.9K
Drug-receptor bonds are formed through various chemical forces when drugs interact with target cells. Covalent bonds, strong and irreversible, are exemplified by DNA-alkylating anticancer agents that inhibit cell division. However, such irreversible drug binding lacks selectivity and can modify the DNA of the surrounding healthy cells. Covalent binding often contributes to tissue toxicity, as seen with chloroform and paracetamol metabolites binding to the liver, causing hepatotoxicity.
In...
In...
2.9K
Prodrugs
2.7K
Prodrugs are a class of pharmaceutical compounds that undergo a biotransformation process within the body to be converted into a pharmacologically active drug. Prodrugs are designed to improve the therapeutic properties of the parent drug, such as enhancing bioavailability, increasing stability, or reducing toxicity. The concept of prodrugs revolves around modifying the chemical structure of the original drug to make it more effective or convenient for administration.
Prodrugs help overcome...
Prodrugs help overcome...
2.7K


