葡萄糖皮质体刺激会在拓相关的领域内诱导区域化的基因反应
Christophe Tav1,2,3, Éric Fournier1,2,3, Michèle Fournier1,2
1Centre de Recherche du CHU de Québec-Université Laval, Axe Oncologie, Québec, QC, Canada.
Frontiers in genetics
|August 14, 2023
概括
葡萄糖皮质激素刺激在拓关联域 (TADs) 内重组转录辅调器MED1和BRD4,影响基因表达. 这表明转录因子诱导区域效应,重新定义了直接和间接的基因调节.
科学领域:
- 分子生物学分子生物学
- 基因组学就是基因组学.
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 将转录因子结合到 cis 调节区域的转录因子控制基因表达.
- 然而,仅仅是转录因子占用率通常是基因响应的糟糕预测指标.
研究的目的:
- 研究葡萄糖皮质激素刺激如何影响在拓关联域 (TADs) 内的转录核心调节器组织.
- 了解TADs和同调节器再分配在调解德甲 (Dex) 反应中的基因表达变化的作用.
主要方法:
- 在德克萨米他刺激后,在TAD中分析MED1和BRD4重组.
- 核心调节器再分配与响应基因RNA水平变化的相关性.
- 研究葡萄糖皮质体受体结合及其与核心调节器招募和基因响应幅度的关系.
主要成果:
- 德克萨米他刺激导致MED1和BRD4在TADs中的重组,创造了活跃或抑制的基因环境.
- 基因表达的变化与MED1和BRD4在cis-regulatory区域的再分配相关.
- 虽然TAD环境起到作用,但直接招募转录因子和同调节剂可以放大基因反应.
结论:
- 信号诱导的转录因子可以在TAD中产生区域效应,影响基因表达.
- 这挑战了关于直接与间接转录因子效应的传统观点,强调了周围基因组环境的重要性.
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