通过重要的生态因素调节转录基因组网络,这些网络通过基本的生态因素调解人参化物生物合成
Zhongce Wang1, Zhiguo Chen2, You Tang1
1College of Electrical and Information Engineering, Jilin Agricultural Science and Technology University, Jilin, Jilin, China.
PloS one
|August 17, 2023
概括
这项研究揭示了环境因素如何使用权重基因共同表达网络分析 (WGCNA) 影响人参中的沙素积累. 它揭示了关键的转录模块,并提出了一种操纵药用植物中沙素生物合成的模型.
科学领域:
- * * 植物科学 植物科学
- * 分子生物学 * 分子生物学
- * 生物信息学是一门学科.
背景情况:
- *人参是一种重要的药用草本,以其健康益处而闻名.
- * 人参中桑的积累受各种环境因素的影响.
- * 了解这些影响对于优化人参种植和药用特性至关重要.
研究的目的:
- * 调查13种环境因素与人参中的沙宁积累之间的关系.
- * 识别与环境影响和氨酸生物合成相关的转录模块.
- * 根据环境数据和转录调节,开发出沙宁含量的预测模型.
主要方法:
- * 权重基因同表达网络分析 (WGCNA) 应用于转录基因数据.
- *分析与13个环境因素和氨酸含量相关联的基因表达模块.
- *为了预测,构建了一个同型白盒神经网络.
主要成果:
- * 确定了40个与环境因素和氨酸积累相关的转录模块.
- * 18个与环境影响有关的模块,22个与沙宁积累相关.
- * 开发并验证了一种预测模型和对素含量的相关性定向图.
结论:
- * 这项研究阐明了环境压力下沙宁积累的转录调节基础.
- * 一个新的模型和定向图可以指导操纵人参中的氨酸生物合成.
- * 调查结果为优化药用植物生产提供了有价值的工具,考虑到环境因素.
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