高灵敏的新生转录序列测定揭示了BRD4特异性的广泛增强剂和标基因转录的控制
Annkatrin Bressin1,2, Olga Jasnovidova1, Mirjam Arnold1,3
1Otto-Warburg-Laboratory, Max Planck Institute for Molecular Genetics, 14195, Berlin, Germany.
Nature communications
|August 17, 2023
概括
研究人员发现,蛋白质BRD4调节了增强剂和相关基因的转录. 这一发现揭示了增强剂活性如何与基因表达得到控制和协调.
科学领域:
- 分子生物学分子生物学
- 基因组学就是基因组学.
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 基因转录由促进剂和增强剂调节,增强剂也被RNA聚合酶II (Pol II) 转录.
- 增强剂转录与基因转录的调节和协调仍然不太清楚.
研究的目的:
- 开发一种高分辨率的方法来研究像增强剂这样的低转录区域的转录.
- 研究控制增强剂转录及其与基因表达的协调的调控机制.
主要方法:
- 开发一种高度敏感的本地延长转录序列 (HiS-NET-seq) 方法.
- 应用HiS-NET-seq在人体细胞中概况转录.
- 多omics分析将HiS-NET-seq数据与其他基因组数据集成在一起.
主要成果:
- HiS-NET-seq在人类细胞中发现了以前未知的转录增强剂.
- 发现全基因组增强剂转录依赖于BET家族蛋白质BRD4.
- 观察到BRD4在增强剂和促进剂近邻区域共定位,促进转录延长并保持增强剂-基因接近.
结论:
- BRD4 作为增强剂转录的一般调节者.
- BRD4可能会将增强剂和它们的基因之间的转录活性联系起来.
- 这项研究为通过增强剂调节基因表达提供了新的见解.
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