转录因子模块NLP-NIGT1微调酸盐转运器2.1表达式
Yoshiaki Ueda1,2, Shuichi Yanagisawa2
1Crop, Livestock and Environment Division, Japan International Research Center for Agricultural Sciences, Ohwashi 1-1, Tsukuba, Ibaraki 305-8686, Japan.
Plant physiology
|August 18, 2023
概括
这项研究揭示了转录因子如何精确地控制酸盐载体NRT2.1在Arabidopsis中的表达. 数学建模和测试表明,NIGT1稳定了NRT2.1的表达,使得工程营养吸收.
科学领域:
- 植物分子生物学 植物分子生物学
- 植物生理学 植物生理学
- 系统生物学 系统生物学
背景情况:
- 阿拉比多普西斯酸盐转运器2.1 (NRT2.1) 对于酸盐的吸收至关重要,由NIN-LIKE蛋白 (NLP) 激活剂和酸盐诱导性GARP类型转录抑制器1 (NIGT1) 抑制剂调节.
- 的可用性会影响NRT2.1的表达,通过PHOSPHATE STARVATION RESPONSE1激活P缺乏的NIGT1.
研究的目的:
- 用系统生物学方法阐明通过多个转录因子对NRT2.1表达的复杂调节.
- 了解控制植物中酸盐吸收的精确控制机制.
主要方法:
- 在不同的营养条件下,基于微板的测定用于实时测量NRT2.1促进体活性.
- 基于普通微分方程 (ODE) 的数学建模来模拟由NLP和NIGT1.1调节的NRT2.1表达模式.
主要成果:
- 实验和建模方法都表明,NIGT1稳定了NRT2.1在不同酸盐度的表达幅度.
- ODE建模确定了关键参数,包括NIGT1mRNA/蛋白质合成速率和促进体结合亲和力,显著影响NRT2.1时间表达.
结论:
- NLP-NIGT1的前循环提供了对酸盐吸收的精确控制.
- 这项研究促进了对植物营养获取调节的理解,支持合成生物学应用用于工程营养吸收.
相关概念视频
Master Transcription Regulators
2.2K
2.2K
General Transcription Factors
5.4K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.4K
Transcriptional Regulation: Riboswitches
61
Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
61
Regulation of Nuclear Protein Sorting
2.4K
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
2.4K
Transcription Attenuation in Prokaryotes
15.4K
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
15.4K
Regulation of Expression at Multiple Steps
943
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
943


