和获取策略驱动土壤中考古遗产系之间的共存模式
Jun Zhao1, Laibin Huang1, Seemanti Chakrabarti1
1Fort Lauderdale Research and Education Center, Department of Microbiology and Cell Science, University of Florida, Davie, FL, 33314, USA.
The ISME journal
|August 18, 2023
概括
土壤古生物 (Nitrososphaeria) 通过专门从事不同的营养摄取,如氨和,并存. 碳固定等核心功能在各个血统中保持一致,显示出不同土壤环境中的利基分区.
科学领域:
- 微生物生态学 微生物生态学
- 环境微生物学 环境微生物学
- 考古基因组学 考古基因组学
背景情况:
- 土壤是地球上最大的古生物学储存库,其中尼特罗斯菌占据全球土壤古生物学多样性的主导地位.
- 尼特罗斯菌的进化成功与适应各种环境条件有关.
- 在土壤中推动竞争和共存的机制Nitrososphaeria血统并不清楚.
研究的目的:
- 调查土壤中占主导地位的Nitrososphaeria血统之间的竞争和共存的遗传基础.
- 了解生态生理学策略,允许不同的考古遗迹在土壤中壮成长.
主要方法:
- 在土壤中占主导地位的Nitrososphaeria血统中对基因库存和表达特征进行比较分析.
- 与纯种植基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因基因.
主要成果:
- 主要的土壤Nitrososphaeria系表现出用于营养物质 (氨,尿素,酸盐) 的独特基因配置.
- 参与碳固定,呼吸和ATP合成的基因被保存,并在主要血统中一致表达.
- 在最佳条件下,在位基因表达模式与纯种植数据保持一致.
结论:
- 在土壤中的Nitrososphaeria系中,基于资源的共存模式很明显.
- 不同的营养获取策略表明,对于全球占主导地位的考古遗迹谱系来说,有互补的生态生理学.
更多相关视频
11:37Simultaneous DNA-RNA Extraction from Coastal Sediments and Quantification of 16S rRNA Genes and Transcripts by Real-time PCR
Published on: June 11, 2016
17.8K
10:31Isolation and Analysis of Microbial Communities in Soil, Rhizosphere, and Roots in Perennial Grass Experiments
Published on: July 24, 2018
54.8K
相关概念视频
Diversity of Archaea II
37
Archaea, one of the three domains of life, exhibit remarkable diversity and adaptability, thriving in both extreme and moderate environments. Historically, most identified archaea have been classified into two major phyla: Euryarchaeota and Crenarchaeota. However, recent molecular studies have expanded this classification to include three additional phyla: Thaumarchaeota, Nanoarchaeota, and Korarchaeota, each exhibiting unique characteristics and ecological roles.Thaumarchaeota: Mesophiles...
37
Diversity of Archaea III
32
Crenarchaeota, a prominent phylum of Archaea, is remarkable for its ability to thrive in extreme environments characterized by high temperatures and acidity. These microorganisms inhabit sulfuric hot springs, volcanic systems, and submarine hydrothermal vents, where temperatures often exceed 100°C. The unique adaptations of Crenarchaeota not only allow survival under such extreme conditions but also provide insights into the mechanisms of life in primordial Earth-like...
32
The Phosphorus Cycle
37.5K
Unlike carbon, water, and nitrogen, phosphorus is not present in the atmosphere as a gas. Instead, most phosphorus in the ecosystem exists as compounds, such as phosphate ions (PO43-), found in soil, water, sediment and rocks. Phosphorus is often a limiting nutrient (i.e., in short supply). Consequently, phosphorus is added to most agricultural fertilizers, which can cause environmental problems related to runoff in aquatic ecosystems.
37.5K
Diversity of Archaea I
34
Archaea, a domain of single-celled microorganisms, are classified into five major phyla based on genetic and biochemical characteristics: Euryarchaeota, Crenarchaeota, Thaumarchaeota, Korarchaeota, and Nanoarchaeota. Among these, the phylum Euryarchaeota is notable for its remarkable diversity in morphology, metabolism, and ecological adaptations.Morphological and Metabolic DiversityMembers of Euryarchaeota exhibit a variety of cellular shapes, including rods and cocci. Their metabolic pathways...
34
Nucleoid
45
The nucleoid represents a structurally and functionally distinct region within prokaryotic cells, where the cell's DNA and associated proteins are housed. Unlike eukaryotic cells, prokaryotes lack a membrane-bound nucleus, and the nucleoid facilitates the organization and accessibility of the genetic material within this constraint. The DNA in most bacteria and archaea exists as a single, circular, double-stranded molecule that is highly compacted through supercoiling and interactions with...
45
Inorganic Nitrogen Assimilation
44
Nitrogen is an essential element in biological systems, forming a crucial component of proteins, nucleic acids, and other cellular constituents. Many bacteria and archaea acquire nitrogen in the form of nitrate (NO₃⁻) or ammonia (NH₃), which are then assimilated into biomolecules through specific enzymatic pathways.Assimilatory Nitrate ReductionWhen nitrate enters the cell, it undergoes a two-step reduction process known as assimilatory nitrate reduction. Initially, the enzyme...
44
