基于废水的流行病学:小社区病毒传播动态的关键作用
Marc-Denis Rioux1, François Guillemette2, Karine Lemarchand3
1Department of Mathematics and Engineering, Université du Québec à Rimouski, Quebec, QC, Canada.
Frontiers in public health
|August 21, 2023
概括
废水监测 (WWS) 数据的解释得到了新的数值模型的改进. 这个模型更好地将废水中的病毒载量与临床病例相关联,特别是在较小的社区.
科学领域:
- 环境微生物学环境微生物学
- 公共卫生监督是对公共卫生的监督.
- 数学建模的数学建模
背景情况:
- 废水监测 (WWS) 对于COVID-19后的疫情管理至关重要.
- 对临床病例的WWS数据的解释具有挑战性,特别是在具有高可变性的小社区.
- 现有的方法很难将病原体度直接与事故病例联系起来.
研究的目的:
- 开发和评估用于解释WWS数据的数值模型.
- 改善WWS测量和临床病例之间的相关性.
- 专门解决小社区监控方面的挑战.
主要方法:
- 在2021年春季从六个加拿大市镇收集的废水监测数据.
- 开发一个包含病毒动力学减小函数的数值模型.
- 模型对流行病原体和事件病原体病例进行了计算.
主要成果:
- 数值模型显著提高了WWS数据的可解释性.
- 病毒动力学减少模型在较小的社区产生了更大的影响.
- 该模型将特定社区的解释从+1.5%转移到+48.8%,改善了相关性.
结论:
- 拟议的数值模型增强了临床病例和WWS数据之间的相关性,特别是在小社区.
- 该模型的生物基础表明它在WWS分析中具有普遍适用性.
- 对于旨在将测量结果与临床结果联系起来的WWS研究,建议将此模型整合进来.
更多相关视频
09:26Quantification and Whole Genome Characterization of SARS-CoV-2 RNA in Wastewater and Air Samples
Published on: June 30, 2023
1.2K
06:54Author Spotlight: Understanding and Detecting Environmental Antimicrobial Resistance by Combining Culture-Based Techniques and Genomics
Published on: July 19, 2024
1.1K
相关概念视频
Steps in Outbreak Investigation
152
In the ever-evolving field of public health, statistical analysis serves as a cornerstone for understanding and managing disease outbreaks. By leveraging various statistical tools, health professionals can predict potential outbreaks, analyze ongoing situations, and devise effective responses to mitigate impact. For that to happen, there are a few possible stages of the analysis:
152
Viral Recombination
23.5K
Cells are sometimes infected by more than one virus at once. When two viruses disassemble to expose their genomes for replication in the same cell, similar regions of their genomes can pair together and exchange sequences in a process called recombination. Alternatively, viruses with segmented genomes can swap segments in a process called reassortment.
23.5K
Principles of Disease Surveillance
124
Disease surveillance is the systematic collection, analysis, and interpretation of health data essential to the planning, implementation, and evaluation of public health practice. This process integrates data dissemination to entities responsible for preventing and controlling disease, injury, and disability. Surveillance systems provide crucial information for action, helping public health authorities make informed decisions to manage and prevent outbreaks, ensure public safety, optimize...
124
Viral Mutations
32.4K
A mutation is a change in the sequence of bases of DNA or RNA in a genome. Some mutations occur during replication of the genome due to errors made by the polymerase enzymes that replicate DNA or RNA. Unlike DNA polymerase, RNA polymerase is prone to errors because it is not capable of “proofreading” its work. Viruses with RNA-based genomes, like HIV, therefore accrue mutations faster than viruses with DNA-based genomes. Because mutation and recombination provide the raw material...
32.4K
Viruses of Archaea
30
Archaeal viruses play a crucial role in the ecosystems of extremophilic archaea, particularly those belonging to the phyla Euryarchaeota and Crenarchaeota. By shaping host evolution and facilitating gene transfer, these viruses influence microbial communities and contribute to genetic diversity in extreme environments. The archaea they infect thrive in acidic hot springs and hydrothermal vents characterized by high temperatures and low pH. Archaeal viruses exhibit remarkable structural...
30
Infection
8.1K
When a pathogen enters the body and reproduces, it can cause an infection, damage body cells, and cause illness symptoms that eventually lead to disease. Therefore, its prevention requires breaking the chain of infection.
The chain begins with pathogens: bacteria, viruses, fungi, prions, or parasites such as protozoa helminths. These can be present on the skin as transient or resident flora, or they can be acquired from the environment. Identifying and treating the type of infection and...
The chain begins with pathogens: bacteria, viruses, fungi, prions, or parasites such as protozoa helminths. These can be present on the skin as transient or resident flora, or they can be acquired from the environment. Identifying and treating the type of infection and...
8.1K
