副本数变异 (CNVs) 在转诊为遗传癌症检测的患者中占致病变异的10.8%
Konstantinos Agiannitopoulos1, Georgia Pepe2, Georgios N Tsaousis2
1Genekor Medical S.A, Athens, Greece; kagiannitopoulos@genekor.com.
Cancer genomics & proteomics
|August 29, 2023
概括
生殖系拷贝数变异 (CNVs) 是遗传癌症的重要遗传贡献者. 使用下一代测序 (NGS) 多基因面板分析CNV对于改善遗传性癌症测试的诊断产量至关重要.
科学领域:
- 遗传学 遗传学 是一个
- 在瘤学瘤学.
- 生物信息学是一种生物信息学.
背景情况:
- 生殖系拷贝数变异 (CNV) 是遗传性癌症倾向的一个关键遗传因素.
- 下一代测序 (NGS) 技术越来越多地用于临床环境中的多基因面板分析.
研究的目的:
- 评估用于从NGS数据检测CNV的计算工具的性能.
- 在癌症敏感性测试中评估CNV对致病变异的贡献.
主要方法:
- 在52个基因小组上使用向NGS选了2,163名患者的癌症易感性.
- 评估了SeqPilot CNV模块,panelcn.MOPS和数字MLPA,用于从NGS数据中检测CNV.
主要成果:
- 在21.5%的患者中发现了致病性/可能致病性变体.
- CNV占所有致病变体的10.8%,结直肠 (28.6%) 和乳腺/卵巢 (10.2%/6.8%) 癌症患者的发病率更高.
结论:
- 从NGS数据中进行in silico CNV检测是一种可行且具有成本效益的诊断方法.
- 冠状病毒占病原性变异的很大一部分,因此对其进行评估对于提高遗传性癌症分析产量至关重要.
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