PAS域的起源和功能多样化,这是一个无处不在的细胞内传感器
Jiawei Xing1,2, Vadim M Gumerov1,2, Igor B Zhulin1,2
1Department of Microbiology, The Ohio State University, Columbus, OH, USA.
Science advances
|August 30, 2023
概括
每个Arnt-Sim (PAS) 域是重要的生物传感器. 这项研究追踪了它们的细菌起源,横向转移到古生物和真核生物,以及各种传感功能,为药物设计提供了洞察力.
科学领域:
- 分子生物学分子生物学
- 进化生物学 进化生物学
- 生物化学 生物化学
背景情况:
- 信号感知对于生物活动和环境适应至关重要.
- 每Arnt-Sim (PAS) 域是细菌,古生物和真核生物中广泛存在的传感器.
- PAS域的进化起源,分布和功能多样性需要进一步描述.
研究的目的:
- 调查PAS域在生命中的进化起源和分布.
- 描述近300万个PAS域的功能多样性.
- 探索细菌PAS域在药物设计中的潜力.
主要方法:
- 序列保存和结构信息的分析.
- 遗传学分析以推断进化的历史.
- 进行比较基因组学来追踪域分布.
主要成果:
- PAS域可能起源于细菌,并横向转移到古生物和真核生物.
- 气体传感通过血红素辅因子独立地进化了多次.
- 使用flavin辅因子的氧化和光传感具有共同的进化起源.
- 很大一部分PAS域的功能已被预测.
结论:
- PAS域表现出不同的进化轨迹和传感机制.
- PAS域的进化历史为理解它们的功能提供了一个框架.
- 人类PAS域与细菌同类共享祖先,为新药发现提供了机会.
相关概念视频
Assembly of Signaling Complexes
5.8K
Multiprotein signaling complexes are formed in a dynamic process involving protein-protein interactions at the cytoplasmic domain of transmembrane receptors or enzymatic and non-enzymatic proteins associated with the receptor. These complexes ensure the activation and propagation of intracellular signals that regulate cell functions.
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
5.8K
IP3/DAG Signaling Pathway
12.2K
Membrane lipids such as phosphatidylinositol (PI) are precursors for several membrane-bound and soluble second messengers. Specific kinases phosphorylate PI and produce phosphorylated inositol phospholipids. One such inositol phospholipids are the phosphatidylinositol-4,5 bisphosphate [PI(4,5)P2], present in the inner half of the lipid bilayer. Upon ligand binding, GPCR stimulates Gq proteins to turn on phospholipase Cꞵ. Activated phospholipase Cꞵ cleaves PI(4,5)P2 and...
12.2K
Structure of Porins
3.0K
Mitochondria, chloroplasts, and gram-negative bacteria have transmembrane, beta-barrel proteins called porins to mediate the free diffusion of ions and metabolites across the membrane. Mitochondrial porin precursors contain conserved amino acid sequences called beta signals at their C-terminal. Beta signals have a motif of PoXGXXHyXHy (Po-Polar, X-Any amino acid, G-Glycine, Hy-LargeHydrophobic), which are crucial for precursor recognition to initiate precursor assembly. Beta-barrel...
3.0K
Intracellular Signaling Affects Focal Adhesions
2.7K
Integrins act both as extracellular input receivers and as intracellular processing activators. As their name suggests, integrins are entirely integrated into the membrane structure. Their hydrophobic membrane-spanning regions interact with the phospholipid bilayer's hydrophobic region. These membrane receptors provide extracellular attachment sites for effectors like hormones and growth factors. They activate intracellular response cascades when their effectors are bound and active.
Some...
Some...
2.7K
The JAK-STAT Signaling Pathway
9.0K
Several cytokine receptors have tightly bound Janus kinase or JAK proteins attached at their cytosolic tail. Small signaling molecules such as cytokines, growth hormones, or prolactins bind to the cytokine receptors and initiate their dimerization. The dimerization brings the cytosolic JAKs together that trans-phosphorylate and activates each other. The activated JAKs now phosphorylate cytosolic tails of the cytokine receptors, which serve as binding sites for adaptor proteins such as SH2...
9.0K
Phosphoinositides and PIPs
8.6K
Phosphoinositides are a group of phospholipids containing a glycerol backbone with two fatty acid chains and a phosphate attached to a myoinositol sugar ring. The inositol head group extends into the cytoplasm, where it is modified by adding phosphate groups to form phosphatidylinositol phosphates or PIPs.
Different phosphoinositides are synthesized and recruited on the cytosolic face of the plasma membrane. The localization of specific phosphoinositides concentrated in separate membrane...
Different phosphoinositides are synthesized and recruited on the cytosolic face of the plasma membrane. The localization of specific phosphoinositides concentrated in separate membrane...
8.6K


