缩短的CRISPR-Cas9阵列可以从更小的DNA足迹中对细菌进行多重基因向
Sandra Gawlitt1, Chunyu Liao1, Tatjana Achmedov1
1Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Center for Infection Research (HZI), Würzburg, Germany.
RNA biology
|September 1, 2023
概括
缩短CRISPR阵列,这些阵列为CRISPR-Cas9基因编辑编码指导RNA (gRNA),可以保持或改善准活动. 这种优化允许在细菌中更有效的多重基因编辑和调节.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物技术是生物技术.
背景情况:
- 克里斯普尔-卡斯系统使用导向RNA (gRNA) 来进行基因编辑和调节.
- 克里斯普尔数组使用重复和间隔器自然编码多个gRNA.
- 现有的CRISPR阵列可能比当前的CRISPR技术所需要的要长得多.
研究的目的:
- 调查CRISPR数组是否可以在不失去功能的情况下缩短.
- 为了确定阵列缩短对CRISPR-Cas9准活动的影响.
- 在细菌应用中探索缩短CRISPR阵列的潜在好处.
主要方法:
- 在大肠杆菌中系统缩短CRISPR阵列.
- 多复合基因抑制试验以评估向活动.
- 分析阵列长度与编辑/调节效率之间的关系.
主要成果:
- 可以缩短CRISPR阵列,目标活动的损失最小或没有损失.
- 缩短一些间隔器出乎意料地提高了准效率.
- 增强的活动与处理前转录数组的折叠有关.
结论:
- 缩短的CRISPR-Cas9数组可用于多重编辑和调节.
- 优化的阵列为细菌CRISPR应用提供了更小的DNA足迹.
- 阵列结构和折叠影响CRISPR系统的性能.
相关概念视频
CRISPR/Cas9 Genome Editing
49
The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
49
CRISPR
52.3K
Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
52.3K
CRISPR and crRNAs
17.1K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
17.1K
The Antiviral System of Bacteria and Archaea: CRISPR
53
CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats is a adaptive immune system found in bacteria and archaea that protects against viral infections. This system enables prokaryotic cells to identify, remember, and neutralize foreign genetic elements, primarily bacteriophages, by storing fragments of the invader’s DNA as a genetic memory.The CRISPR immune response begins during an initial infection. Cas (CRISPR-associated) proteins play a central role in this...
53
Conservative Site-specific Recombination and Phase Variation
6.0K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
6.0K
Homologous Recombination
50.6K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.6K


