在转录的不同阶段,RNA聚合酶II酸化的独特相互作用体在转录的不同阶段发生
Rosamaria Y Moreno1, Kyle J Juetten2, Svetlana B Panina1
1Department of Molecular Biosciences, University of Texas, Austin, TX, USA.
iScience
|September 4, 2023
概括
的RNA聚合酶II.
科学领域:
- 分子生物学分子生物学
- 基因表达 基因表达
- 生物化学 生物化学
背景情况:
- 细胞转录涉及RNA聚合酶II的C终端域 (CTD) 上的动态后翻译修饰 (PTM).
- CTD酸化模式,特别是Ser5和Ser2的酸化模式,在空间和时间上与不同的转录阶段相关.
- 这些酸化事件将特定的转录调节剂招募到RNA聚合酶II.
研究的目的:
- 为了研究不同转录阶段与RNA聚合酶II相关的蛋白质相互作用体.
- 了解特定的CTD酸化模式 (Ser2和Ser5) 如何决定蛋白质合作伙伴的招募.
- 为了确定参与转录相关蛋白质招募的新型调节者.
主要方法:
- 在 Ser5 和 Ser2 *in vitro* 中重建CTD酸化模式.
- 在定义的酸化状态下,对RNA聚合酶II招募的蛋白质相互作用的分析.
- 特定的蛋白质-PTM相互作用的特征,包括平衡内网膜蛋白 (CHERP) 的作用.
主要成果:
- 基于CTD Ser2和Ser5酸化,不同的蛋白质相互作用被招募到RNA聚合酶II中.
- 鉴定出稳态内细胞网膜蛋白 (CHERP) 是一种与-Ser2 CTD heptad 结合的蛋白质.
- 波尔II与CHERP的关联招募了一个辅助拼接综合体,影响了替代拼接事件.
结论:
- 在转录过程中,CTD酸化模式作为代码来招募特定阶段的蛋白质相互作用体.
- 通过与-Ser2 CTD的相互作用,CHERP在协调转录和替代拼接方面发挥着作用.
- 这项研究阐明了PTM编码的招募机制,该机制控制着转录调节.
相关概念视频
Transcription Initiation
16.5K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.5K
RNA Polymerase II Accessory Proteins
9.2K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.2K
Eukaryotic RNA Polymerases
24.3K
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
24.3K
General Transcription Factors
5.4K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.4K
Bacterial Transcription
28.4K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
28.4K
Bacterial RNA Polymerase
29.6K
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
29.6K


