基因组资源联盟:转变比较基因组学
Carol J Bult1, Paul W Sternberg2
1The Jackson Laboratory, Bar Harbor, ME, USA. carol.bult@jax.org.
概括
基因组资源联盟 (联盟) 创建了一个知识共享区,用于比较跨物种的基因功能,表型和疾病. 这个平台通过将模型生物的数据与人类信息相结合,帮助研究人类生物学和疾病.
科学领域:
- 进行比较的基因组学.
- 系统生物学 系统生物学
- 生物信息学是一种生物信息学.
背景情况:
- 跨物种的基因组和生物比较对于理解人类生物学和疾病至关重要.
- 模型生物提供了对分子和细胞机制的关键见解.
- 将模型生物的发现转化为人类临床应用需要综合知识.
研究的目的:
- 建立一个可扩展的知识共享平台,用于跨物种比较策划的生物信息.
- 为了促进基因功能,表型和疾病协会在模型生物和人类的调查.
- 支持从模型生物到临床应用的机械洞察的翻译.
主要方法:
- 基因组资源联盟 (联盟) 联盟整合了七个模型生物知识库和基因本体学资源.
- 一组常见的基因正统论断言用于跨物种注释比较.
- 共享的程序访问,统一的网页和交互式接口使比较生物学成为可能.
主要成果:
- 联盟数据库整合了基因功能,表型等位基因/变异,人类疾病关联,途径,基因表达和相互作用数据.
- 研究人员现在可以更容易地比较跨模型生物和人类的生物注释.
- 该平台提供了一个统一的"外观和感觉",以及用于比较分析的交互工具.
结论:
- 联盟为比较生物学提供了一个可扩展的"知识公共资源".
- 它的模块化基础设施支持额外的模型生物体的集成.
- 该资源增强了研究人员利用模型生物数据用于人类健康研究的能力.
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