RNA螺旋酶Dbp2和Mtr4调节酵母中Xrn1-敏感的长非编码RNA的表达
Maxime Wery1, Ugo Szachnowski1, Sara Andjus2
1ncRNA, Epigenetic and Genome Fluidity, Institut Curie, Sorbonne Université, CNRS UMR3244, Paris Cedex, France.
概括
两个RNA螺旋酶Dbp2和Mtr4在全球范围内调节酵母长非编码RNA (lncRNAs),特别是XUTs. 它们的无活化或耗尽导致XUTs的积累,揭示了它们在lncRNA表达控制中的关键作用.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 在RNA生物学,RNA生物学.
背景情况:
- 酵母长非编码RNAs (lncRNAs),特别是XUTs,由RNA监测通路进行调节.
- 控制XUT降解的特定辅助因子和机制在很大程度上仍未被描述.
研究的目的:
- 为了确定酵母中XUTs表达的全球调节者.
- 为了阐明XUT衰变背后的分子机制.
主要方法:
- 使用RNA测序 (RNA-Seq) 来分析转录组.
- 进行了基因失活和特定RNA基酶的枯竭.
- 进行了各种细胞质RNA螺旋酶的突变分析.
主要成果:
- Dbp2和Mtr4被确定为XUTs的全球调节者.
- Dbp2的无活化或Mtr4的耗尽导致了XUTs的显著积累.
- 这种XUT稳定是Dbp2和Mtr4的特异性,因为其他测试的螺旋酶没有显示相同的效果.
- Dbp2和Mtr4影响了XUT,而不依赖于它们的感觉-mRNA配置.
- Dbp2对XUTs的影响取决于其细胞质局部.
结论:
- Dbp2和Mtr4是酵母中lncRNA表达的关键全球调节者.
- 这些酶在通过RNA衰变途径塑造非编码转录组中发挥着重要作用.
相关概念视频
mRNA Stability and Gene Expression
5.6K
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
5.6K
Translational Regulation
42
Translational regulation in prokaryotes ensures efficient protein synthesis by controlling ribosome access to mRNA. This regulation is mediated by secondary RNA structures, including translational riboswitches, RNA thermometers, and small RNAs (sRNAs), which respond to intracellular and environmental signals to modulate gene expression.Translational RiboswitchesRiboswitches in the leader region of mRNAs can regulate translation by altering the accessibility of the Shine-Dalgarno (SD) sequence,...
42
Regulation of Expression at Multiple Steps
943
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
943
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K
Regulation of Expression Occurs at Multiple Steps
22.8K
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
22.8K
Transcriptional Regulation: Riboswitches
61
Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
61


