功能分离的细根在微生物组合,微生物功能潜力和产生的代谢物方面有所不同
William L King1,2, Caylon F Yates1,3, Lily Cao1,3,4
1Department of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, Pennsylvania, USA.
Plant, cell & environment
|September 7, 2023
概括
根功能,而不仅仅是大小,塑造微生物群落. 吸收性和传输性细根是不同的细菌和微生物功能的主机,揭示了关键的主机对根微生物群的选择性压力.
科学领域:
- 植物和微生物生态学
- 土壤科学 土壤科学
- 分子生态学分子生态学
背景情况:
- 传统的细根根按大小分类忽略了功能多样性.
- 微生物组研究通常会将根组分为组,可能会混微生物信号和宿主过.
- 了解根-微生物相互作用需要区分根功能类型.
研究的目的:
- 研究根功能 (吸收性与传输性) 如何影响微生物群落和功能.
- 为了比较微生物群落和吸收和传输细根之间的代谢.
- 根据根功能来确定根微生物组区间的宿主选择性压力.
主要方法:
- 在一个共同的花园中,从四种温带树种中取样精细的根.
- 将根分为吸收型和传输型的功能类型.
- 使用16S rRNA基因测序,枪头元基因组学和代谢学.
主要成果:
- 真菌和细菌群落在吸收和传输细根之间存在显著差异.
- 细菌群体仅在吸收性根系中显示了树和树球之间的差异.
- 根系细菌,根代谢和潜在的微生物功能因根的功能而异,而不是根系细菌.
结论:
- 根功能是塑造根微生物关系的关键因素.
- 主体选择性压力根据根功能在根微生物组区间之间有所不同.
- 区分细根功能类型对于准确的微生物组分析至关重要.
关键词:
微生物的功能是微生物的功能.这种植物是Rhizoplane.根系球 (Rhizosphere) 是一个根系球.根微生物组是根的微生物组.根的顺序是根的顺序.根生理学 根生理学空间殖民化的空间殖民化.更多相关视频
相关概念视频
Microbial Morphologies
43
Bacterial and archaeal cells exhibit remarkable diversity in shape and structure, critical in their adaptability and functionality. Among bacteria, the most commonly observed shapes include cocci and bacilli. Cocci are spherical and may exist singly or in groupings such as pairs (diplococci), chains (streptococci), clusters (staphylococci), or tetrads. Bacilli, in contrast, are rod-shaped and can also occur as single cells, in pairs, or chains, depending on their environmental and genetic...
43
Microbial Nutrition
57
Organisms exhibit remarkable metabolic diversity, categorized based on how they acquire energy and carbon. These strategies enable survival in various ecological niches and are essential for maintaining energy flow and nutrient cycling within ecosystems.Energy and Carbon SourcesOrganisms are classified as phototrophs or chemotrophs based on energy acquisition. Phototrophs use light as their energy source, while chemotrophs rely on oxidizing chemical compounds. Further differentiation arises...
57
Modern Molecular Taxonomy
47
Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
47
Microbial Fermentation
61
Fermentation is a crucial anaerobic metabolic process that enables microbes to derive energy from sugar without relying on oxygen or an electron transport chain. This process is fundamental to various biological and industrial applications and is classified based on the metabolic products generated.Role of Pyruvate in FermentationPyruvate and its derivatives serve as key electron acceptors in fermentative pathways. The oxidation of NADH to regenerate NAD+ is essential for the continuation of...
61
Bacterial Phylum Firmicutes
42
Firmicutes is a diverse phylum of Gram-positive bacteria characterized by a low GC content in their genomes. This phylum includes organisms with monoderm or diderm cell envelopes, highlighting a complex evolutionary history. Firmicutes comprises several major orders, including Lactobacillales, Clostridiales, and Bacillales, which exhibit remarkable diversity in their morphology, metabolism, and ecological roles.The order Lactobacillales includes lactic acid bacteria, which are fermentative...
42
Microbial Growth Measurement: Indirect Methods
60
Estimating microbial growth is essential for understanding population dynamics and environmental adaptations. Indirect methods provide valuable insights by measuring parameters such as turbidity, metabolic activity, and biomass, enabling efficient and reproducible assessments.During exponential growth, microbial cells scatter light proportionally to their biomass, a principle used in turbidity measurements. About one million cells per milliliter produce detectable scattering, which a...
60


