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ChromatoShiny:一个交互式的R/Shiny应用程序,用于绘制染色学配置文件
Natalia Y Kochanova1, Maria Alba Abad1, Petra Vizjak2
1Wellcome Centre for Cell Biology, The University of Edinburgh, Edinburgh, Scotland, EH9 3BF, UK.
Wellcome open research
|September 11, 2023
概括
本研究介绍了一款交互式R Shiny应用程序,用于分析液体染色学数据. 该工具增强了染色体解释和出版数字生成,不需要编程经验.
科学领域:
- 生物化学 生物化学
- 生物物理学的生物物理.
- 结构生物学 结构生物学
- 染色体学 染色体学 是一种染色学.
背景情况:
- 在Akta液态染色学仪器上使用的UnicornTM软件可以生成纯化生物大分子的染色图形.
- 现有的软件缺乏用于详细分析的高级注释,定制和出口功能.
研究的目的:
- 开发一个交互式应用程序,以改善染色图的解释.
- 为了促进从染色学数据生成出版质量的数据.
主要方法:
- 利用R Shiny框架构建一个交互式Web应用程序.
- 该应用程序集成了基线拟合,分数突出显示和图形放大功能.
主要成果:
- 该应用程序使用户能够适应基线,并突出显示特定的分数或化体积.
- 用户可以轻松地放大图片,以便详细检查染色学配置文件.
- 在https://ChromatoShiny.bio.ed.ac.uk.上免费提供一个交互式应用程序.
结论:
- 开发的应用程序不需要编程专业知识,使其可供广泛的用户使用.
- 它使染色学用户能够高效地生成信息和注释的染色体图.
- 该工具简化了数据可视化流程,用于发布和分析.
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