跨SARS-CoV-2变种的纵向研究确定了与三角洲严重程度相关的转录活性微生物 (TAM)
Priti Devi1,2, Pallawi Kumari1, Aanchal Yadav1,2
1Division of Immunology and Infectious Disease Biology, INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) Laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Mall Road, Delhi 110007, India.
iScience
|September 13, 2023
概括
新的SARS-CoV-2变种,如Delta和Omicron,会影响鼻微生物组. 特定的细菌,特别是蛋白质细菌,与炎症和严重程度的增加有关,特别是在三角洲变种.
科学领域:
- 微生物学 微生物学
- 免疫学 免疫学 免疫学
- 基因组学就是基因组学.
背景情况:
- 新出现的SARS-CoV-2令人担忧的变种 (VOCs) 对全球免疫构成威胁.
- 主体微生物群相互作用可能会影响VOC感染的临床过程.
研究的目的:
- 调查与SARS-CoV-2 VOCs (三角形和欧米克朗) 相关的鼻微生物组组成和功能.
- 探索宿主微生物群相互作用及其对临床结果的影响.
主要方法:
- 鼻微生物组的纵向全转录组分析.
- 分类学概况和代谢途径分析.
- 宿主微生物组基因相关性网络的综合性分析.
主要成果:
- 挥发性有机化合物,特别是三角洲,显示了蛋白质细菌的丰富,其中占主导地位的是伪虫和青杆菌.
- 克莱布西拉肺炎在三角洲感染中显著,与促进炎症的通路相关.
- 特定的细菌 (Acinetobacter,Pseudomonas) 调节了免疫路径,可能会增加Delta变种的严重程度.
- 机会主义物种在与三角洲相关的死亡率中很丰富.
结论:
- 在SARS-CoV-2 Delta感染中,增加的鼻腔病原体和失调的宿主反应之间存在功能联系.
- 鼻微生物组在调节VOC感染期间的疾病严重程度和结果方面发挥着至关重要的作用.
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