在2022年之前,在人类中共循环的明显的水病毒系
Nnaemeka Ndodo1, Jonathan Ashcroft2, Kuiama Lewandowski3
1Nigeria Centre for Disease Control, Abuja, Nigeria.
Nature medicine
|September 14, 2023
概括
在2022年之前的几年里,尼日利亚流传了多种麻疹病毒 (MPXV) 血统,显示出适应潜力. 基因组数据显示了突变,包括A.2血统,突出显示了持续的人与人之间的传播和病毒进化.
科学领域:
- 病毒学 病毒学
- 基因组学就是基因组学.
- 流行病学 流行病学
背景情况:
- 2022年全球mopox疫情突出了了解麻疹病毒 (MPXV) 人类传播和适应方面的差距.
- 由于基因组数据有限,2017年尼日利亚疫情和2022年全球mopox爆发之间的进化联系尚不清楚.
研究的目的:
- 调查2018年至2022年间尼日利亚MPXV的基因组多样性和进化史.
- 为了确定出口的MPXV系的起源,包括A.2系.
主要方法:
- 来自尼日利亚南部的18个MPXV分离物的全基因组测序 (2019-2020年).
- 遗传学分析以确定血统关系和进化途径.
- 特定突变的识别,包括与APOBEC3活动相关的突变.
主要成果:
- 在2022年之前的几年里,多个MPXV血统在尼日利亚人类中共同循环.
- 以前独立出口的A.2血统起源于尼日利亚,并通过人与人之间的传播持续了两年多.
- 在A.2分离物的A46R基因中发现了一种定义血统的APOBEC3相关突变,可能会影响病毒免疫调节.
结论:
- MPXV表明了人类群体内持续多样化和适应的能力.
- 在流行地区了解疫情爆发前的病毒演变对于预测和控制未来的mopox流行病至关重要.
- 在人类溢出事件期间,APOBEC3介导的突变可能在MPXV的适应和进化中发挥作用.
相关概念视频
Viral Recombination
23.5K
Cells are sometimes infected by more than one virus at once. When two viruses disassemble to expose their genomes for replication in the same cell, similar regions of their genomes can pair together and exchange sequences in a process called recombination. Alternatively, viruses with segmented genomes can swap segments in a process called reassortment.
23.5K
Retrovirus Life Cycles
46.1K
Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the...
46.1K
Single Nucleotide Polymorphisms-SNPs
15.2K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
15.2K
Retroviruses
12.4K
Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
12.4K
Viral Mutations
32.4K
A mutation is a change in the sequence of bases of DNA or RNA in a genome. Some mutations occur during replication of the genome due to errors made by the polymerase enzymes that replicate DNA or RNA. Unlike DNA polymerase, RNA polymerase is prone to errors because it is not capable of “proofreading” its work. Viruses with RNA-based genomes, like HIV, therefore accrue mutations faster than viruses with DNA-based genomes. Because mutation and recombination provide the raw material...
32.4K
Viruses with RNA Genomes
55
RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...
55


