绘制人类免疫系统的拼接景观
Hadas Ner-Gaon1, Ronnie Peleg2, Roi Gazit2
1Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Frontiers in immunology
|September 15, 2023
概括
大多数人类基因产生多个转录,影响细胞功能. 这项研究绘制了免疫细胞中差异转录使用 (DTU) 事件的地图,揭示了细胞类型特定的模式和潜在的调节者.
科学领域:
- 免疫学 免疫学 免疫学
- 基因组学就是基因组学.
- 分子生物学分子生物学
背景情况:
- 大多数人类基因产生多个不同的RNA转录.
- 差异转录使用 (DTU) 有助于蛋白质多样性和细胞调节.
- 在免疫系统中报告的DTU事件很少,只有PTPRC和CIITA等少数例外.
研究的目的:
- 在不同类型的人体免疫细胞中全面绘制DTU事件.
- 研究DTUs在免疫中的细胞类型特异性和调节机制.
- 评估免疫条件对转录使用的影响.
主要方法:
- 利用四个公开的RNA测序数据集进行分析.
- 在五种健康的人类免疫细胞类型中识别和目录DTU事件.
- 与拼接因子和转录因子的表达相关联的DTU模式.
主要成果:
- 在五种免疫细胞类型的至少两个数据集中发现了282个DTU事件.
- 观察到的DTU模式主要是特定于细胞类型或特定于细胞系.
- 发现败血症显著改变了先天性免疫细胞的拼接,但很少有其他条件.
- DTU显示与监管因子表达有相关性.
结论:
- 在人类外周血液免疫细胞中建立了DTU的景观.
- 鉴定了数百个基因,细胞类型之间或激活时转录使用变化.
- 突出了DTU在免疫细胞识别和反应中的作用.
相关概念视频
Chromatin Structure and RNA Splicing
2.7K
2.7K
RNA Splicing
56.5K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
56.5K
Diversity of Antigen Receptors
627
Antigen receptors are essential components of the immune system crucial in defending the body against foreign invaders. These receptors are present on the surface of B and T cells, enabling them to recognize antigens and mount an appropriate immune response.
Before encountering any antigen, lymphocytes express these receptors. On B cells, the antigen receptor is a membrane-bound antibody molecule called BCR; on T cells, it is a T cell receptor or TCR. B and T cell receptors are composed of two...
Before encountering any antigen, lymphocytes express these receptors. On B cells, the antigen receptor is a membrane-bound antibody molecule called BCR; on T cells, it is a T cell receptor or TCR. B and T cell receptors are composed of two...
627
Pre-mRNA Processing: RNA Splicing
5.3K
5.3K
Cells of the Adaptive Immune Response
1.0K
The T and B lymphocytes of the adaptive immune system develop from common lymphoid progenitor cells in the bone marrow. These progenitors give rise to precursors that eventually develop into both T and B lymphocytes. As these precursors mature, they gain the ability to detect and respond to foreign antigens in the body, a process known as immunocompetence. Additionally, these precursors acquire self-tolerance, a process that ensures they do not react to self-antigens. This intricate system...
1.0K
Antigen Processing Pathways
1.1K
MHC molecules are key players in the immune response, enabling T cells to recognize and respond to specific antigens. They are present on the surface of all nucleated cells in the body and are instrumental in presenting antigens to T cells and activating them. T cells recognize the MHC-antigen complex and initiate an immune response. MHC class I and MHC class II are two main types of MHC molecules, each associated with a distinct antigen processing pathway.
MHC Class I: Presenting Endogenous...
MHC Class I: Presenting Endogenous...
1.1K


