全球形状 SvGT,一个金属依赖的细菌素修改S / O-HexNActransferase从actinobacteria:c-终端二元化调节这个GT的功能
Yogita Sharma1, Shimona Ahlawat1,2, Ashish1,2
1CSIR-Institute of Microbial Technology, Chandigarh, India.
Journal of biomolecular structure & dynamics
|September 15, 2023
概括
这项研究揭示了S/O-HexNActransferase SvGT的形状功能,SvGT对于Streptomyces venezuelae中的细菌素SvC糖化至关重要. 2+离子激活SvGT,诱导其酶活性必不可少的结构变化.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 微生物学 微生物学
背景情况:
- 细菌素是通过核糖体合成的抗微生物.
- 糖基化可以改变细菌素的活性和特性.
- 具体的酶SvGT在糖化中的作用以前没有被描述.
研究的目的:
- 为了阐明S/O-HexNActransferase SvGT的结构功能关系.
- 了解细菌SvC糖化酶的机制.
- 调查Mg2+离子在SvGT激活中的作用.
主要方法:
- 使用了凝过,质谱,分析超离心和小角度X射线散射 (SAXS).
- 进行了酶试验,以评估功能活性.
- 用Alphafold2建模和SAXS实验数据进行结构改进.
主要成果:
- 在溶液中,SvGT表现出一个长长的二维形状.
- 酶活性取决于Mg2+离子的可用性.
- 结合Mg2+会诱导二元体的形状变化,形成C2对称.
结论:
- SvGT的二维结构和Mg2+激活对于糖化非常重要.
- 在催化动机附近保存的残留物对活性至关重要.
- 需要对C端区域进行进一步的研究,以了解基质选择性.
相关概念视频
Overview of Secretory Vesicles
8.6K
Secretory vesicles, also known as dense core vesicles (DCVs), are membrane-bound vesicles that transport secretory proteins, such as hormones or neurotransmitters. Regulated secretory vesicles transport proteins from the trans-Golgi network to the exterior of the cell. Proteins present in regulated secretory vesicles are required to be rapidly exocytosed in large amounts upon a specific stimulus.
Various proteins regulate the aggregation of molecules inside the secretory vesicles. Chromogranins...
Various proteins regulate the aggregation of molecules inside the secretory vesicles. Chromogranins...
8.6K
Transduction
38
Among the three main modes of HGT—transformation, conjugation, and transduction—transduction is unique in that it is mediated by bacteriophages, or bacterial viruses.Transduction occurs in two ways. Generalized transduction occurs during the lytic cycle of a bacteriophage infection. In this process, bacteriophages infect bacterial cells, replicate within them, and ultimately cause cell lysis, releasing newly assembled virions. Occasionally, random fragments of the bacterial genome...
38
Gram-negative Bacterial Protein Secretion Systems
45
Gram-negative bacteria utilize sophisticated protein secretion systems to transport proteins across their double-membrane envelope into the extracellular environment or host cells. Based on their mechanism of action, these systems are classified into one-step and two-step pathways.One-Step Secretion Systems (Types I, III, IV, and VI)One-step secretion systems bypass the periplasm entirely, forming a continuous channel that spans both the inner and outer membranes:Type I Secretion System (T1SS):...
45
Bacterial Translocation and Protein Secretion
39
Bacterial protein secretion involves translocation systems to ensure proteins reach their designated locations, including the plasma membrane, periplasm, outer membrane, or the external environment. These translocation systems are vital for bacterial physiology, supporting processes like membrane assembly, enzymatic activity in the periplasm, and interactions with the external environment. The division of labor between Sec and Tat pathways ensures efficiency in handling proteins with diverse...
39
Horizontal Gene Transfer
39
Horizontal gene transfer (HGT) is a process where genetic material moves between organisms within the same generation, unlike vertical gene transfer, which occurs from parent to offspring. HGT plays a crucial role in microbial evolution, adaptation, and survival, particularly in shared environments like the human gut.Mobile genetic elements such as plasmids, prophages, integrons, insertion sequences, and transposons facilitate this process. HGT occurs through three primary mechanisms:...
39
Coat Assembly and GTPases
3.6K
Vesicles incorporate different coat protein subunits in different cell locations, which changes the properties of the coat, such as the shape and geometry of the transport vesicles. Thus, vesicle coat proteins also play a significant role in cargo selection.
Coat assembly depends on the local availability of phosphatidylinositol phosphates or PIPs and GTP-binding proteins. Adaptor proteins, which link the coat proteins to the membrane, bind to these PIPs and play a crucial role in controlling...
Coat assembly depends on the local availability of phosphatidylinositol phosphates or PIPs and GTP-binding proteins. Adaptor proteins, which link the coat proteins to the membrane, bind to these PIPs and play a crucial role in controlling...
3.6K


