展开蛋白质和IDP中的本地和大规模构造动力学. 我. 我. 我. 我. 我. 我. 我. 溶剂粘度和大分子拥挤的影响
Karin Stecher1, Florian Krieger2, Michael Schleeger3
1Chemistry Department, Technische Universität München, Lichtenbergstrasse 4, Garching D-85747, Germany.
The journal of physical chemistry. B
|September 18, 2023
概括
蛋白质动态受溶剂相互作用的影响. 这项研究使用三重三重能量转移 (TTET) 来显示溶剂粘度和拥挤如何影响未折叠蛋白和内在失序蛋白 (IDP) 的循环形成.
科学领域:
- 生物物理学的生物物理.
- 蛋白质动力学 蛋白质动力学
- 生物化学 生物化学
背景情况:
- 蛋白质/溶剂相互作用显著影响蛋白质动力学,特别是在未折叠和内在无序蛋白质 (IDP) 中.
- 了解这些相互作用对于破译细胞环境中的蛋白质功能和行为至关重要.
研究的目的:
- 为了研究内部蛋白质运动和溶剂运动之间的合.
- 确定溶剂粘度和宏分子拥挤对未折叠的多链和IDP中的循环形成速率常数的影响.
主要方法:
- 三重三重能量转移 (TTET) 光谱学的应用.
- 溶剂粘度 (η) 和共同溶解物大小的系统变化.
- 分析各种未折叠的多链中的循环形成速率常数 (k),包括IDP.
主要成果:
- 循环形成的粘度取决于氨基酸序列,循环长度和共同溶液大小.
- 低于临界尺寸 (r) 的共同溶液最大限度地影响粘度依赖,表明微粘度与大粘度相匹配.
- 对于典型的细胞模拟器,循环形成速率常数尺度为k η−0.1,表明细胞动态的边际调制.
结论:
- 蛋白循环形成动态与溶剂运动相结合,合的程度取决于链特性和溶剂环境.
- 细胞环境可能只对展开的蛋白质的动态施加微小的约束.
- 这些发现为管理溶液和拥挤环境中的蛋白质动态的物理原理提供了洞察力.
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