人类基因组中凸起的G-四重复形成序列的数据集
Csaba Papp1, Piroon Jenjaroenpun2,3, Vineeth T Mukundan4
1Department of Urology, Department of Biochemistry and Molecular Biology, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Data in brief
|September 25, 2023
概括
这项研究确定并验证了人类基因组中稳定凸起的G-四重复合体 (G4-BS) 的三个模型. 提供的数据集可以进一步研究它们在基因调节中的作用和潜在的治疗应用.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 生物信息学是一种生物信息学.
背景情况:
- G四重复体 (G4s) 是由富含关氨酸的序列形成的二次DNA结构.
- G4s调节基因表达,DNA-蛋白结合,表观遗传修饰和遗传毒性压力.
- 凸起的G-四重复合体 (G4-BS) 在全基因组识别方面存在独特的结构挑战.
研究的目的:
- 在人类基因组中识别和验证稳定的G4-BS构造.
- 为进一步研究提供G4-BS的全面数据集.
- 探索G4-BS的结构,功能和进化作用.
主要方法:
- 在体外研究.
- G4-seq 和 G4 CUT&Tag 数据分析.
- 开发和验证三个pG4-BS模型.
主要成果:
- 指定并验证了三个不同的pG4-BS模型.
- 介绍了G4-BS的大型原始数据集,包括三个子家族.
- 为每个pG4-BS.提供了链特异性基因组边界.
结论:
- 经过验证的pG4-BS模型和数据集有助于对这些结构进行全基因组研究.
- 数据可以阐明G4-BS的结构,功能和进化作用.
- 研究结果为G4类病理生物学和治疗潜力提供了洞察力.
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