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相关概念视频

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

5.8K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
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Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

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The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
7.2K
Genomics02:02

Genomics

36.4K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
36.4K
Next-generation Sequencing03:00

Next-generation Sequencing

89.8K
The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
89.8K
Synteny and Evolution02:31

Synteny and Evolution

3.3K
John H. Renwick first coined the term “synteny” in 1971, which refers to the genes present on the same chromosomes, even if they are not genetically linked. The species with common ancestry tend to show conserved syntenic regions. Therefore, the concept of synteny is nowadays used to describe the evolutionary relationship between species.
Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral...
3.3K
Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

4.0K
Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
4.0K

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相关实验视频

Updated: Jul 15, 2025

Neuronal Nuclei Isolation from Human Postmortem Brain Tissue
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Neuronal Nuclei Isolation from Human Postmortem Brain Tissue

Published on: October 1, 2008

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解码DNA序列驱动的进化人类大脑表观基因组在细胞分辨率.

Emre Caglayan1,2, Genevieve Konopka1,2

  • 1Department of Neuroscience, UT Southwestern Medical Center, Dallas, TX 75390, USA.

bioRxiv : the preprint server for biology
|September 25, 2023
PubMed
概括

这项研究揭示了人类大脑表观基因组的进化变化,使用单细胞ATAC-seq. 胎儿微细胞显示分歧,而保存的元素与大脑疾病有关.

科学领域:

  • 基因组学就是基因组学.
  • 进化生物学 进化生物学
  • 神经科学是一个神经科学.

背景情况:

  • 比较基因组学提供了对功能性遗传变化的洞察.
  • 组织的可访问性可能会限制对大脑的进化研究.

研究的目的:

  • 为了发现人类和祖先猿类大脑表观基因组中的血统特异性DNA替代.
  • 为了确定基因调节和细胞身份的进化模式.

主要方法:

  • 使用成人和胎儿皮层单细胞ATAC-seq数据集.
  • 使用多原子数据将调节元素与基因和通路联系起来.
  • 分析了跨血统的转录因子结合部位进化.

主要成果:

  • 胎儿微细胞表现出跨血统的进化分歧;其他细胞类型被保留.
  • 鉴定了与血统分离的调节元件和涉及的生物学途径相关的基因.
  • 观察到谱系特定的转录因子结合位点演变,包括bHLH-PAS和MEF2因子.
  • 保存的基因组特征在脑疾病变体中得到丰富.

结论:

  • 人类大脑表观基因组在细胞分辨率上显示出显著的进化模式.

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A Chromatin Assay for Human Brain Tissue
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Isolation and Cultivation of Neural Progenitors Followed by Chromatin-Immunoprecipitation of Histone 3 Lysine 79 Dimethylation Mark
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A Chromatin Assay for Human Brain Tissue
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  • 胎儿微中的血统分歧和特定的转录因子扩张突出了独特的进化轨迹.
  • 保存的调节元素,而不是人类血统特定的,与大脑疾病风险有关.