在核细胞脱甲基化中NPAC-LSD2复合体.
Jonatan Caroli1, Andrea Mattevi1
1Department of Biology and Biotechnology "Lazzaro Spallanzani", University of Pavia, Pavia, Italy.
The Enzymes
|September 25, 2023
概括
与细胞循环相关的核蛋白 (NPAC) 是一种转录性联合激活剂,对RNA聚合酶进展至关重要. 它组织表观遗传活动,通过与基因素修饰剂相互作用来促进转录延长.
科学领域:
- 分子生物学分子生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 基因规则 基因规则
背景情况:
- 与细胞循环相关的核蛋白 (NPAC) 是一种与H3K36me3表观遗传标记相关的转录辅激剂.
- NPAC对于RNA聚合酶进展和基因转录至关重要,其耗尽导致下调.
研究的目的:
- 审查目前关于多域蛋白NPAC的功能和结构特征的知识.
- 阐明NPAC在协调转录延长的表观遗传活动中的作用.
主要方法:
- 对NPAC的PWWP动机和脱酶域的结构分析.
- 研究NPAC与LSD2的相互作用及其在基因素脱甲基化中的作用.
- 对LSD2-G9a-NSD3复合物的分析,用于修改基因素标记和染色质结构.
主要成果:
- NPAC的PWWP动机作为染色质结合剂,可能会削弱聚合酶通路的DNA-基因素接触.
- 脱酶域形成一个四聚体,促进共同转录复合体的形成.
- NPAC与LSD2的相互作用促进了H3K4me1/2的去除,而LSD2-G9a-NSD3复合体产生了一个转录耐火状态.
结论:
- NPAC充当了支架因素,组织了表观遗传修改,以实现最佳的转录延长.
- NPAC集成了不同的蛋白质域,以促进RNA聚合酶的进展和调节基因表达.
更多相关视频
相关概念视频
Nucleosome Remodeling
9.2K
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
9.2K
Spreading of Chromatin Modifications
8.3K
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
Writers
The writer...
8.3K
The Nucleosome Core Particle
936
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
936
Histone Modification
13.4K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
13.4K
Chromatin Modification in iPS Cells
1.7K
Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
1.7K
The Nucleosome
16.3K
DNA in a human cell is almost 2m long and it is packed inside a tiny nucleus that is only a few microns in diameter. The level of compaction of DNA inside the nucleus is astonishing. It is organized into several sequentially higher levels of compaction to fit into such a tiny space. The most compact form of DNA is a chromosome that can be seen under a microscope in a dividing cell.
DNA is wound twice around a protein complex called histone core, that consist of 8 histone proteins. This complex...
DNA is wound twice around a protein complex called histone core, that consist of 8 histone proteins. This complex...
16.3K


