将血蛋白质组与全基因组关联数据集成,用于在多发性骨髓瘤中因果蛋白鉴定
Qiangsheng Wang1, Qiqin Shi2, Zhenqian Wang3
1Department of Hematology, Ningbo Hangzhou Bay Hospital, Ningbo, 315000, Zhejiang, China.
BMC medicine
|September 29, 2023
概括
这项研究确定了13种与多发性骨髓瘤 (MM) 风险有因果关系的蛋白质,包括6种风险因素和7种保护因素. 这些发现为MM药物开发提供了潜在的新治疗点.
科学领域:
- 遗传学 是一个遗传学.
- 蛋白质组学是指蛋白质组学.
- 在瘤学瘤学.
背景情况:
- 多发性骨髓瘤 (MM) 是一种严重且致命的B细胞癌.
- 识别与MM有因果遗传联系的蛋白质对于发现新的治疗点至关重要.
研究的目的:
- 调查2994蛋白与MM风险之间的因果关系.
- 确定新型蛋白质生物标记物和多发性骨髓瘤的潜在治疗点.
主要方法:
- 使用全基因组关联研究数据进行双样本门德尔随机化 (MR) 分析.
- 进行了灵敏度分析,KEGG路径分析和MR-贝叶斯模型平均值 (MR-BMA).
- 与药物数据库进行交叉引用,以评估蛋白质的药用性.
主要成果:
- 发现13种蛋白与MM风险有因果关系 (P <0.05).
- 六种蛋白质 (例如NAMPT,TIE1,NCF2) 与MM风险有关.
- 七种蛋白质 (例如,SOCS3,FCGR3B,GPC1) 与MM风险相反相关.
- SOCS3,FCGR3B和NCF2在骨质细胞分化途径中得到了丰富.
- 根据MR-BMA,GPC1,NAMPT和NCF2是排名第一的MM相关蛋白.
- 针对四种蛋白质的治疗方法正在评估中,五种是可药物治疗的,四种显示出未来的突破潜力.
结论:
- 该研究确定了13种与MM风险有因果关系的新型蛋白质.
- 这些蛋白质代表了多发性骨髓瘤的潜在新型治疗点.
- 整合基因组和蛋白质组数据可以促进MM药物开发.
更多相关视频
09:52A Clinical Metaproteomics Workflow Implemented within Galaxy Bioinformatics Platform to Analyze Host-Microbiome Interactions Underlying Human Disease
Published on: January 10, 2025
633
10:37Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
12.0K
相关概念视频
Proteomics
7.4K
A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
7.4K
Protein Networks
4.0K
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
4.0K
Genome-wide Association Studies-GWAS
13.6K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
13.6K
