对猪转录基因组产生异位基因特异性的调节效应.
Yu Lin1, Jing Li1,2, Li Chen3,4
1Livestock and Poultry Multi-omics Key Laboratory of Ministry of Agriculture and Rural Affairs, College of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China.
GigaScience
|September 30, 2023
概括
这项研究对猪的等位基特异性表达 (ASE) 进行了表征,揭示了新的印记转录,并确定了转调作为特定品种表达差异和适应性可塑性的关键驱动因素.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 动物科学动物科学
背景情况:
- 同基因特异表达 (ASE) 影响了适应性表型可塑性.
- 在猪身上研究了印记和依赖序列的ASE.
研究的目的:
- 来自欧洲伯克希尔和亚洲藏族品种的杂交猪中的ASE类的特征.
- 在体组织中检查转录类型 (PCG, lncRNAs,未知).
主要方法:
- 采用了不同品种猪之间的相互交叉模型.
- 分析了来自杂交猪和纯种猪的转录组.
- 在7个体质组织中检查了3种转录类型.
主要成果:
- 确定了92个假定印制的成绩单,有69个新发现.
- 通过转调节发现~6.59%的PCG通过品种之间的差异表达.
- 约1.35%的PCG显示cis调节,与促进体变异相关.
结论:
- 转规显著推动了猪品种之间的表达差异和适应性可塑性.
- 发现了新的打印成文和cis调节机制.
- 提供了用于猪品种改进的表达法规的全面地图.
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