全物种的定量转录组和蛋白质组揭示了酵母酵母基因表达变异的独特遗传控制
bioRxiv : the preprint server for biology
|October 2, 2023
概括
蛋白质和mRNA水平的遗传控制显著不同. 这项研究揭示了转录组和蛋白质组的独特遗传基础,这对于理解基因型-表型联系至关重要.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 系统生物学 系统生物学
背景情况:
- 基因表达将基因型与表型联系起来.
- 了解整个物种对蛋白质丰富性的遗传控制及其与转录水平的关系是有限的.
研究的目的:
- 为了确定各种酵母分离物的大量种群中的定量蛋白质.
- 调查蛋白质和转录丰度变化的遗传基础.
- 探索基因型,转录组和蛋白质组之间的关系.
主要方法:
- 对942个Saccharomyces cerevisiae分离物的定量蛋白质组分析.
- 对mRNA和蛋白质丰度相关性的分析.
- 基因关联研究以确定蛋白质定量特征位点 (pQTL) 和表达定量特征位点 (eQTL).
主要成果:
- 在基因水平上观察到mRNA和蛋白质丰度之间的弱相关性 (ρ = 0.165).
- 蛋白质组共同表达网络反映了主要的生物功能,具有特定于种群的蛋白质组特征.
- 影响蛋白质 (pQTL) 和转录水平 (eQTL) 的遗传变异之间存在显著差异,只有3.6%的重叠.
结论:
- 转录组和蛋白质组是由不同的遗传因素调节的,这可能是由于蛋白质的循环.
- 整合蛋白质组和转录组数据对于全面了解基因型-表型关系至关重要.
- 这项研究强调了基因表达调节的复杂性,超出了转录水平.
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