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通过基因复制,转移,损失和并行进化来实现乌比金生物合成的多样化
Katayoun Kazemzadeh1, Ludovic Pelosi1, Clothilde Chenal1
1Univ. Grenoble Alpes, CNRS, UMR 5525, VetAgro Sup, Grenoble INP, TIMC, 38000 Grenoble, France.
Molecular biology and evolution
|October 3, 2023
概括
乌比金 (UQ) 基酶通过基因重复,新功能化和水平基因转移进行多样化,从而产生不同的酶子家族. 这种进化解释了UQ生物合成如何在各种生物体中适应.
科学领域:
- 微生物生物化学 微生物生物化学
- 进化基因组学是进化的基因组学.
- 酶的功能 酶的功能
背景情况:
- 乌比金 (UQ) 对于Eukarya和Pseudomonadota中的生物能量非常重要.
- UQ生物合成需要通过UQ-基酶催化三个连续的基化.
- UQ-基酶属于Coq7或黄单氧酶 (FMO) 家族.
研究的目的:
- 研究推动UQ-基酶功能多样化的进化机制.
- 了解UQ-基酶如何在UQ通路内演化出不同的选择性.
- 阐明基因复制,新功能化和基因转移在进化途径中的作用.
主要方法:
- 进行比较的基因组学.
- 人类遗传学分析
- 实验方法的实验方法.
主要成果:
- 弗拉单氧酶 (FMO) UQ-基酶通过基因重复,新功能化和子功能化多样化成六个子家族.
- 观察到UbiM酶的多个基因转移.
- UQ-FMOs的融合进化导致祖先的Coq7酶的独立损失.
结论:
- 乌比奎农生物合成途径通过并行进化,基因重复,水平基因转移和基因丢失的组合而多样化.
- 酶进化,包括新功能化和融合进化,允许基本代谢途径的适应.
- 了解这些进化动态,可以了解微生物的功能多样化.
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