微生物的全球多样性和推断生态生理学,这些微生物有潜力降低 dissimilatory 硫酸盐/硫酸盐
Muhe Diao1, Stefan Dyksma1, Elif Koeksoy1
1Department of Microorganisms, Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig D-38124, Germany.
FEMS microbiology reviews
|October 5, 2023
概括
减少硫酸盐/硫酸盐的微生物 (SRM) 广泛存在,驱动硫循环. 这项研究使用dsrAB基因重新定义了SRM多样性,揭示了新的代谢潜力,并更新了dsrAB数据库以供未来研究.
科学领域:
- 微生物学 微生物学
- 地质化学 地质化学
- 基因组学就是基因组学.
背景情况:
- 减少硫酸盐/硫酸盐的微生物 (SRM) 对全球硫循环至关重要.
- 不相似的硫酸盐还原酶 (dsrAB) 基因是SRM的一个标志.
- 以前对SRM多样性和新陈代谢的理解是有限的.
研究的目的:
- 重新定义能够进行非仿真硫酸盐/硫酸盐减少的微生物的全球多样性.
- 发现新的遗传谱,并挑战有关SRM能量代谢的现有概括.
- 为环境调查提供最新的DSRAB数据库和环境调查的初步建议.
主要方法:
- 分析了950个由元基因组衍生的dsrAB携带基因组.
- 对dsrAB,dsrL和dsrd基因类型的生物信息分析.
- 微生物血统的分类学和遗传学分析.
主要成果:
- 19个细菌和2个考古学科群都存在未经特征的SRM.
- 包括Desulfobacterota在内的四个类型显示出在减少硫和氧化之间切换的潜力.
- dsrAB,dsrL和dsrD基因变异指导了不相似的硫代谢的推断方向.
结论:
- 新发现的SRM具有多样化的生态生理学,扩大了我们对微生物代谢的理解.
- SRM的多样性被置于最近细菌和古生物学分类学转变的背景下.
- 为全球研究SRM提供了一个更新的框架和数据库.
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