发现B型肝炎相关肝硬化免疫微环境和分子亚型,并通过机器学习和人工神经网络开发稳定的诊断差异模型
Shengke Zhang1, Chenglu Jiang1, Lai Jiang1
1Department of Clinical Medicine, School of Clinical Medicine, Affiliated Hospital of Southwest Medical University, Luzhou, China.
Frontiers in molecular biosciences
|October 9, 2023
概括
这项研究确定了六个关键基因,用于使用生物信息学诊断与乙型肝炎相关的肝硬化 (HBV-LC). 这些发现使得HBV-LC患者的早期检测和潜在的治疗策略成为可能.
科学领域:
- 肝病学 肝病学是一种肝病学.
- 生物信息学是一种生物信息学.
- 基因组学就是基因组学.
背景情况:
- 与乙型肝炎相关的肝硬化 (HBV-LC) 显著影响患者的生活质量,并具有挑战性治疗.
- 目前用于HBV-LC的治疗方法通常是无效的,肝移植受捐赠者的可用性和成本限制.
- 早期诊断和亚型分类对于管理HBV-LC和预防肝细胞癌 (HCC) 至关重要.
研究的目的:
- 通过生物信息学分析识别HBV-LC的潜在诊断生物标志物.
- 使用共识聚类将HBV-LC分为不同的亚型.
- 开发用于早期诊断和HBV-LC风险分层的预测模型.
主要方法:
- 使用GEO数据库数据集 (GSE114783,GSE84044) 进行特征基因查.
- 使用差异分析,WGCNA,LASSO,SVM-RFE和RF用于基因识别.
- 构建的人工神经网络 (ANN) 和名ogram模型用于预测和验证.
主要成果:
- 基于六个已识别的特征基因开发了一种ANN模型和名图.
- 通过共识聚类将HBV-LC分为两种亚型 (C1和C2).
- 免疫透分析表明C2亚型可能与较轻的临床症状相关.
结论:
- 该ANN模型和名图显示了HBV-LC诊断的高预测能力.
- 这些模型为早期检测和治疗HBV-LC提供了一种新的方法.
- 亚型HBV-LC患者可以指导未来的临床治疗策略.
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