鉴定癌症亚型基于胚胎和造血干细胞的签名在泛癌的癌症
Jiali Lei1,2,3, Jiangti Luo1,2,3, Qian Liu1,2,3
1Biomedical Informatics Research Lab, School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing, 211198, China.
Cellular oncology (Dordrecht, Netherlands)
|October 11, 2023
概括
使用胚胎 (ESC) 和造血 (HSC) 干细胞签名识别了癌症干细胞亚型. ESC表明预后不佳,而HSC和HSC/ESC比率表明癌症患者的治疗结果更好.
科学领域:
- 癌症研究 癌症研究
- 干细胞生物学 干细胞生物学
- 多个omics的分析分析.
背景情况:
- 癌症干性有助于瘤的发展和治疗耐药性.
- 多omics技术使得癌症干的探索成为可能.
- 有限的研究结合了癌症亚型的多种干细胞签名.
研究的目的:
- 基于独特的干细胞特征的泛癌亚型.
- 调查已识别的癌症亚型的临床和分子影响.
主要方法:
- 在33种癌症类型中对10,323个TCGA癌症标本进行了聚类.
- 利用来自六个干性基因组的丰富度得分.
- 纳入胚胎干细胞 (ESC) 和造血干细胞 (HSC) 的背景.
主要成果:
- 确定了四种泛癌亚型 (StC1-StC4),具有明显的分子和临床特征.
- 亚型显示了茎状,基因组完整性,瘤微环境和治疗反应的变化.
- 全癌症亚型在蛋白质水平上是可复制的.
结论:
- ESC签名与不良的癌症预后相关.
- HSC签名和HSC/ESC比率表明一个积极的预后因素.
- 基于ESC和HSC签名的亚型化为癌症生物学和临床管理提供了洞察力.
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