心脏增强剂中的单核酸变体增加了结合亲和力,并破坏了心脏发育
Granton A Jindal1, Alexis T Bantle2, Joe J Solvason3
1Department of Medicine, Health Sciences, University of California, San Diego, La Jolla, CA 92093, USA; Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Developmental cell
|October 17, 2023
概括
增强剂中的低最佳结合点对于精确的基因表达至关重要. 单核酸变异可以改变结合亲和力,导致发育缺陷和疾病.
科学领域:
- 发展生物学 发展生物学
- 遗传学 遗传学是一种遗传学.
- 进化生物学 进化生物学
背景情况:
- 转录增强剂调节基因表达,对发育和表型变异至关重要.
- 鉴定与基因表达变化和表型相关的特定增强剂变异仍然是一个重大挑战.
- 增强剂内的低亲和度结合点对于精确的发育基因调节至关重要.
研究的目的:
- 研究心脏发育过程中亚最佳结合点在增强器功能中的作用.
- 确定影响结合亲和力的单核酸变体 (SNV) 如何影响基因表达和表型.
- 探索这些发现对人类疾病和进化的影响.
主要方法:
- 对Ciona robusta中的增强剂序列和结合位点进行比较分析.
- 使用人类诱导多能干细胞 (iPSC) 衍生的心肌细胞的功能性测试.
- 评估SNV引入后的基因表达变化和表型结果.
主要成果:
- 低于最佳的ETS结合点对于精确的心脏发育是必要的.
- 优化ETS结合亲和力的SNVs导致功能的获取 (GOF) 基因表达.
- 这些GOF效应可以导致细胞迁移缺陷,心脏发育异常 (例如,心跳多),以及细胞身份的改变.
结论:
- 在增强剂中存在低亲和位点,代表了对SNVs的脆弱性.
- 亲和优化SNVs可以破坏正常的基因表达,导致显著的表型后果.
- 这些机制可能有助于新特征的演变和疾病的发病.
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