CTCF通过编排具有先驱转录因子的监管枢纽来协调细胞命运规范
Yuting Liu1, Xin Wan2, Hu Li3
1School of Life Sciences, Center for Bioinformatics, Center for Statistical Science, Peking University, Beijing 100871, China.
Cell reports
|October 18, 2023
概括
CCCTC-结合因子 (CTCF) 作为细胞身份辅因子,与先进的转录因子合作,通过形成调控中心来控制细胞特异性基因. 这种机制控制了1D和3D基因组层面的细胞身份.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 细胞生物学 细胞生物学
背景情况:
- CCCTC-结合因子 (CTCF) 对于细胞身份基因转录至关重要.
- 对于CTCF特种功能的精确分子机制还没有完全理解.
研究的目的:
- 研究CTCF在调节细胞身份中的分子机制.
- 阐明CTCF如何与血统特定的转录因子合作.
主要方法:
- 从小鼠和人类获得的初级肝细胞,肌细胞和B细胞的综合分析.
- 使用MyoD-null小鼠,CTCF淘汰小鼠和CRISPR编辑进行验证.
主要成果:
- CTCF与MyoD,FOXA和PU.1.等先驱转录因子 (TF) 进行合作.
- 开拓者TFs通过打开色素 (1D) 来实现CTCF结合.
- CTCF和开拓者TF形成了监管中心,以控制细胞身份基因 (3D).
结论:
- CTCF充当细胞身份辅因子.
- CTCF协调了监管中心与先进的TF来控制细胞身份基因.
- 发现了CTCF介导的细胞身份基因调节的一般机制.
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