通过核体核心粒子中的洞捕获形成DNA - 基因组交叉链
Tingyu Wen1, Maxime Kermarrec2, Elise Dumont3,4
1Department of Chemistry, Johns Hopkins University, 3400 N. Charles St., Baltimore, Maryland 21218, United States.
Journal of the American Chemical Society
|October 19, 2023
概括
电离辐射会产生DNA洞,导致DNA-蛋白交叉链接 (DPC). 这些DPC在核细胞核粒子中形成,影响基因表达.
科学领域:
- 生物化学
- 分子生物学
- 辐射化学
背景情况:
- DNA-蛋白质交叉链 (DPC) 是由DNA基离子 (孔) 形成的.
- 关于染色体中DPC形成的详细研究是有限的.
- 核素核心粒子 (NCP) 是染色体的基本单位.
研究的目的:
- 综合检查国家控制点内的DPC形成情况.
- 调查DNA孔位置对DPC形成的影响.
- 为了确定参与DPC形成的特定基因组残留物.
主要方法:
- 在自下而上的NCP中引入特定地点的DNA洞.
- 对DPC产量的分析和与性损伤的比较.
- 质谱学和突变基因组分析.
- 微秒时间尺度的计算模拟.
主要成果:
- 在NCP的DNA洞中形成DPC,其产量与水陷伤相比较.
- DPC形成的效率和位置偏好取决于NCP中的DNA定位.
- 基因组的N端尾和氨基末端,特别是氨酸残留物,都与DPC形成有关.
- 三个连续的关氨酸残留物 (dG) 可以产生DPC,可能会影响基因表达.
结论:
- DPC 形成是核酶体内DNA 氧化的重要结果.
- 在NCP中的DNA和蛋白质定位极大地影响了DPC的形成.
- 特定的DNA序列,如G丰富的区域,可以促进DPC的形成,对基因调节有影响.
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