相关实验视频
Updated: Jul 12, 2025

11:51
Potato Virus X-Based microRNA Silencing VbMS In Potato.
Published on: May 11, 2020
3.2K
通过使用RNA测序来探索田间采集的土豆叶样本中病毒的存在.
Esraa A Elwan1, Mona Rabie1, Engy E Abdel Aleem1
1Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria, 21511, Egypt.
Journal, genetic engineering & biotechnology
|October 20, 2023
概括
下一代测序 (NGS) 快速识别各种土豆病毒,包括常见和不太常见的菌株,以及其他微生物在现场条件下. 这种先进的技术对于有效的植物疾病管理和病原体发现至关重要.
科学领域:
- 植物病毒学 植物病毒学
- 基因组学就是基因组学.
- 微生物组分析
背景情况:
- 准确的病毒识别对于管理植物疾病至关重要.
- 下一代测序 (NGS) 提供了发现和检测植物病原体的潜力.
- 用RNA测序 (RNA-Seq) 来研究田间种植的土豆植物中的病毒.
研究的目的:
- 使用RNA-Seq技术探索和识别土豆植物中的病毒.
- 评估NGS在检测已知和新型土豆病毒方面的实用性.
- 在田间条件下描述土豆植物的病毒和微生物组成.
主要方法:
- 在三个土豆植物样本 (S3,S4,S6) 上进行了RNA测序 (RNA-Seq).
- 生物信息学分析,包括BLASTn和BLASTx,用于病毒识别.
- 使用RT-PCR和对宿主症状的视觉检查来验证结果.
主要成果:
- 发现和证实了常见的土豆病毒 (AMV,PLRV,PVY).
- 测序了PLRV和其他多方病毒的基因组.
- 检测到较少报告的病毒 (PVV,APLV,ToCV),细菌,真菌和真菌病毒,揭示了复杂的微生物组.
结论:
- 在现场环境中,NGS提供了快速而准确的土豆病毒识别.
- 建议在土豆田和进口植物的全面调查中大规模实施NGS.
- 即使没有症状或不特定,NGS对于检测病毒也很有价值.
更多相关视频
相关概念视频
Subviral Agents
20
Subviral agents are infectious entities that resemble viruses but lack one or more viral components, such as a capsid or essential replication machinery. These agents include viroids, prions, and satellites, each possessing distinct structural and functional characteristics that influence their mode of infection and replication.Viroids are the simplest subviral agents, consisting of circular, single-stranded RNA molecules without a protein coat. They exclusively infect plants, relying entirely...
20
RNA-seq
10.0K
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases.
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
10.0K
Viruses with RNA Genomes
35
RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...
35

