转录因子固态度,动机亲和和语法调节纤维细胞重编程到多能性的过程中单细胞染色质动态
Surag Nair1, Mohamed Ameen2,3,4,5, Laksshman Sundaram1
1Department of Computer Science, Stanford University, Stanford, CA, USA.
bioRxiv : the preprint server for biology
|October 24, 2023
概括
诱导多能干细胞 (iPSC) 是使用OCT4,SOX2,KLF4和MYC (OSKM) 生成的. 早期的重编程涉及过渡性调节元素和AP-1 TF封存,导致体基因沉默.
科学领域:
- 细胞重编程和干细胞生物学.
- 表观遗传学和基因调节.
- 计算生物学和生物信息学.
背景情况:
- 在体细胞中,OCT4,SOX2,KLF4和MYC (OSKM) 的异位表达会诱导多能性.
- 了解细胞重编程的早期机械阶段对于完善该过程至关重要.
- 单细胞分辨率分析提供了在重新编程过程中对细胞异质性的洞察.
结论:
- 该研究提供了对控制重编程动态的Cis-regulatory代码的高分辨率视图.
- TF体积测量和动机语法影响细胞命运轨迹的多样化.
- 暂时的调节元素在重编程过程中对体基因沉默起着动态作用.
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