TudS脱硫酶在催化 [4Fe-4S] 集群中回收4 - 氨基-5'-单酸盐
Jonathan Fuchs1, Rapolas Jamontas2, Maren Hellen Hoock3
1Faculty of Biology - Microbiology, University of Freiburg, 79104, Freiburg, Germany.
Communications biology
|October 27, 2023
概括
细菌脱硫酶TudS酶从tRNA成分4-thiouridine单酸盐中去除硫. 这项研究确定了首选的基质,并证明了TudS酶.
科学领域:
- 生物化学 生化学
- 分子生物学分子生物学
- 酶学 是一种酶学.
背景情况:
- 转移RNAs (tRNAs) 具有转录后硫的修饰,包括2-和4-thiouridine.
- 细菌脱硫酶TudS酶,含有4Fe-4S集群,此前已被证明可以脱硫2-和4-thiouracil.
研究的目的:
- 为了阐明TudS酶的体内功能.
- 在催化过程中提供基质与4Fe-4S集群结合的直接证据.
- 为了确定Tuds的首选基质.
主要方法:
- 动力分析以确定基质偏好.
- 谱学研究检测催化中间体及其自旋状态.
- 在体内功能分析使用Pseudomonas putida KT2440基因产物.
主要成果:
- 鉴定出4-氨基-5'-单酸盐是TudS.的首选基质.
- 对硫和基质结合的催化中间体的观察.
- 在基板结合时切换到催化 [4Fe-4S] 集群的自旋状态 (S=3/2到S=1/2).
- 在体内证明一种Pseudomonas putida KT2440基因产物作为TudS脱硫酶起作用.
结论:
- 类似TudS的酶是广泛存在的脱硫酶.
- 这些酶对于回收和排毒tRNA衍生4-thiouridine单酸盐至关重要.
- 这个过程支持核酸和RNA合成.
更多相关视频
相关概念视频
Sulfur Assimilation
20
Sulfur is an essential element in biological systems, contributing to synthesizing key biomolecules, including amino acids such as cysteine and methionine, and cofactors such as coenzyme A and biotin. Microorganisms primarily assimilate sulfur as sulfate (SO₄²⁻) from the environment, which must undergo a series of biochemical transformations before it can be incorporated into cellular components. As sulfate is highly oxidized, it must undergo assimilatory sulfate reduction to...
20
Electron Transport Chain: Complex III and IV
7.5K
During the electron transport chain, electrons from NADH and FADH2 are first transferred to complexes I and II, respectively. These two complexes then transfer the electrons to ubiquinol, which carries them further to complex III. Complex III passes the electrons across the intermembrane space to Cyt c, which carries them further to complex IV. Complex IV donates electrons to oxygen and reduces it to water. As electrons pass through complexes I, III, and IV, the energy released aids the pumping...
7.5K
Electron Transport Chain: Complex I and II
14.2K
The mitochondrial electron transport chain (ETC) is the main energy generation system in the eukaryotic cells. However, mitochondria also produce cytotoxic reactive oxygen species (ROS) due to the large electron flow during oxidative phosphorylation. While Complex I is one of the primary sources of superoxide radicals, ROS production by Complex II is uncommon and may only be observed in cancer cells with mutated complexes.
ROS generation is regulated and maintained at moderate levels necessary...
ROS generation is regulated and maintained at moderate levels necessary...
14.2K
Structure and Nomenclature of Thiols and Sulfides
4.8K
Thiols and sulfides are sulfur analogs of alcohols and ethers, respectively, where the sulfur atom takes the place of the oxygen atom. Thus, thiols are generally represented as RSH, where R is an alkyl substituent and —SH is the functional group. On the other hand, in sulfides, the central sulfur atom is bonded to two hydrocarbon groups on either side. Depending upon the type of group, sulfides can be either symmetrical or asymmetrical. Both thiols and sulfides display a bent geometry,...
4.8K
Electron Transport Chains
99.0K
The final stage of cellular respiration is oxidative phosphorylation that consists of two steps: the electron transport chain and chemiosmosis. The electron transport chain is a set of proteins found in the inner mitochondrial membrane in eukaryotic cells. Its primary function is to establish a proton gradient that can be used during chemiosmosis to produce ATP and generate electron carriers, such as NAD+ and FAD, that are used in glycolysis and the citric acid cycle.
The ETC is comprised of...
The ETC is comprised of...
99.0K
Preparation and Reactions of Thiols
6.3K
Thiols are prepared using the hydrosulfide anion as a nucleophile in a nucleophilic substitution reaction with alkyl halides. For instance, bromobutane reacts with sodium hydrosulfide to give butanethiol.
6.3K


