基因编码的多重体标签用于在冷EM中定位亚细胞蛋白质
Herman K H Fung1, Yuki Hayashi2, Veijo T Salo1
1Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Nature methods
|November 6, 2023
概括
这项研究引入了基因编码的多重分子粒子 (GEMs),用于使用冷电子断层扫描 (cryo-ET) 精确的细胞内蛋白质定位. 这种方法使得可控制时间的,无标签的蛋白质点成像在他们的本地细胞环境.
科学领域:
- 细胞和分子生物学 细胞和分子生物学
- 生物物理学的生物物理.
- 显微镜和成像技术
背景情况:
- 低温电子断层扫描 (cryo-ET) 可提供高分辨率,无标签的细胞结构成像.
- 在复杂的冷ET数据中定位特定的大分子仍然是一个重大挑战.
研究的目的:
- 开发一种新的,联体诱导的标记策略,用于使用冷ET.准确的细胞内蛋白质定位.
- 为了使目标蛋白在它们的原生细胞环境中实现自动检测和时间控制的可视化.
主要方法:
- 开发具有可识别结构特征的基因编码多重分子 (GEM).
- GEMs与光标记感兴趣的蛋白质的带诱导的合.
- 卷积神经网络在冷ET数据中用于自动检测GEM的应用.
- 人类细胞中的冷相对光和冷ET成像.
主要成果:
- 在各种器官中证明了内源性和过度表达蛋白质的成功亚细胞局部化.
- 验证了冷ET体积中GEMs的自动检测.
- 建立了量化标签特异性和效率的方法.
- 展示了时间控制的标签,以尽量减少对原生蛋白质功能的影响.
结论:
- GEMs提供了一个强大的工具,可以通过cryo-ET精确地,无标签地定位细胞内蛋白质.
- 联体诱导系统允许时间控制,保留原生蛋白质功能.
- 这种方法提高了冷ET在现场研究宏分子组件的能力.
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