相关实验视频
Updated: Jul 11, 2025

08:53
A Reporter Based Cellular Assay for Monitoring Splicing Efficiency
Published on: September 15, 2021
2.8K
通过Npl3p的RNA识别揭示了U2 snRNA结合,这与拼接期间的陪伴角色相兼容
Ahmed Moursy1,2, Antoine Cléry3, Stefan Gerhardy1,4,5
1Department of Biology, Institute of Biochemistry, ETH Zurich, Switzerland.
Nature communications
|November 7, 2023
概括
类似SR的蛋白质Npl3通过其RRMs结合特定的RNA序列,帮助拼接体组装. Npl3充当RNA伴侣,化U2 snRNA以促进结合体催化.
科学领域:
- 分子生物学分子生物学
- 在RNA分离过程中.
- 结构生物学 结构生物学
背景情况:
- 类似SR的蛋白Npl3对于mRNA前拼接至关重要.
- 由Npl3的RNA识别动机 (RRMs) 识别的特定RNA序列是未知的.
研究的目的:
- 确定由Npl3的RRMs结合的RNA序列.
- 阐明Npl3-RNA相互作用的结构基础.
- 为了研究Npl3在spliceosome活动部位形成中的作用.
主要方法:
- 在酵母中分裂集成的RNA捕获晶体 (iCRAC).
- 高分辨率的核磁共振 (NMR) 光谱学.
- 结构引导的功能测试.
主要成果:
- Npl3的RRM2将一个5′-GNGG-3′动图与一个千叶状的拓联系在一起.
- Npl3的RRM1结合了GNGG动机的CC-二核酸上游.
- Npl3融化了U2 snRNA干循环I,促进了U2/U6双重形成.
结论:
- Npl3通过其RRMs识别特定的RNA动机.
- 在spliceosome组装中,npl3充当RNA伴侣的功能.
- Npl3的RNA辅导活动对于spliceosome催化中心的形成至关重要.
相关概念视频
RNA Splicing
56.4K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
56.4K
Nonsense-mediated mRNA Decay
10.6K
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
10.6K
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K
Nuclear Export of mRNA
7.7K
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
7.7K
Pre-mRNA Processing: RNA Splicing
5.3K
5.3K
Alternative RNA Splicing
21.2K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
21.2K

