藻微生物组含有新型病毒,这些病毒编码的基因促进微生物代谢
Alise J Ponsero1,2, Bonnie L Hurwitz1, Nicolas Magain3,4
1BIO5 Institute and Department of Biosystems Engineering, University of Arizona, Tucson, AZ, 85721, USA.
ISME communications
|November 8, 2023
概括
病毒在生态系统中很常见,影响微生物相互作用. 这项研究揭示了在藻类内部的多样性病毒群落,与其他环境不同.
科学领域:
- 微生物学 微生物学
- 菌类学 菌类学是指菌类学.
- 病毒学 病毒学
背景情况:
- 虫是真菌和藻类/蓝藻类的共生协会.
- 除了主要的共生体外,还拥有多样化的细菌和真菌群落.
- 菌体微生物组的病毒成分在很大程度上仍未被探索.
研究的目的:
- 为了研究病毒生物多样性和功能在色体thalli.
- 开发和应用复杂的真核细胞元基因组中的病毒检测方法.
- 了解病毒在菌体共生中的潜在作用.
主要方法:
- 来自北美和欧洲的蓝植物收藏.
- 从元基因组数据中删除真核读取的方法的开发.
- 应用机器学习工具和定制管道用于病毒感染预测和验证.
主要成果:
- 检查的每一个蓝色体都含有多种病毒.
- 这些病毒与其他陆地生态系统中发现的病毒有所区别.
- 预测的病毒宿主包括蓝藻,细菌和藻类,许多病毒结合体缺乏宿主预测.
- 许多病毒辅助代谢基因 (AMG) 被确定,涉及代谢和二次代谢产物.
结论:
- 藻类拥有独特而多样化的病毒群落.
- 病毒对辅助代谢基因进行编码,这些基因可能会影响体内的代谢过程.
- 病毒可能在调节共生中的微生物相互作用和功能方面发挥重要作用.
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