Spt5 C终端重复域酸化和长度通过不同的机制负面调节异色素蛋白
Sarah MacKinnon1, Viviane Pagé1, Jennifer J Chen1
1Department of Pharmacology and Therapeutics, McGill University, Montreal, Canada.
PLoS genetics
|November 8, 2023
概括
这是Spt5蛋白质.
科学领域:
- 表观遗传学和染色质调节
- 基因表达和转录控制
- 通过RNA干扰路径.
背景情况:
- 对基因组稳定性和基因沉默至关重要.
- 矛盾的是,异色色区的转录有助于异色色素的建立.
- 转录机械和异染色蛋白蛋白之间的相互作用尚未完全理解.
研究的目的:
- 为了研究RNA聚合酶II过程性因子Spt5在Schizosaccharomyces pombe中异性染色体调节中的作用.
- 确定Spt5的C端域 (CTD) 如何影响异色素蛋白的形成.
- 阐明Spt5CTD酸化和重复长度在异色染色体控制中的不同作用.
主要方法:
- 在S. pombe.中对Spt5 CTD酸化和重复数量的遗传操纵.
- 使用RNA干扰 (RNAi) 依赖和独立途径对异染色质核和传播的分析.
- 研究Spt5与已知的结合因子 (如Prf1/Rtf1.1) 的相互作用.
主要成果:
- 通过其CTD,Spt5通过其CTD负面调节 heterochromatin.
- 废除Spt5 CTD酸化导致异常的RNAi-依赖的异性染色素的形成.
- 切断Spt5 CTD重复增强了RNAi独立的异染色蛋白形成.
结论:
- Spt5 CTD酸化和CTD长度使用不同的机制来限制异性染色素.
- 在Spt5 CTD重复阵列的长度和酸化状态不同调节转录.
- 这些发现揭示了对转录和异染色蛋白的协调有新的见解.
更多相关视频
11:02Complete Workflow for Analysis of Histone Post-translational Modifications Using Bottom-up Mass Spectrometry: From Histone Extraction to Data Analysis
Published on: May 17, 2016
29.2K
11:06Chromatin Immunoprecipitation ChIP of Histone Modifications from Saccharomyces cerevisiae
Published on: December 29, 2017
12.8K
相关概念视频
Heterochromatin
13.6K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
13.6K
Spreading of Chromatin Modifications
8.3K
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
Writers
The writer...
8.3K
Position-effect Variegation
6.3K
In 1928, a German botanist Emil Heitz observed the moss nuclei with a DNA binding dye. He observed that while some chromatin regions decondense and spread out in the interphase nucleus, others do not. He termed them euchromatin and heterochromatin, respectively. He proposed that the heterochromatin regions reflect a functionally inactive state of the genome. It was later confirmed that heterochromatin is transcriptionally repressed, and euchromatin is transcriptionally active chromatin.
6.3K
Euchromatin
6.9K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
6.9K
Histone Modification
13.3K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
13.3K
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K
