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相关概念视频

Genomic DNA in Eukaryotes00:58

Genomic DNA in Eukaryotes

47.0K
Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
47.0K
The Eukaryotic Promoter Region02:40

The Eukaryotic Promoter Region

16.4K
The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences.  The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
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Cis-regulatory Sequences02:02

Cis-regulatory Sequences

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3.0K
Eukaryotic RNA Polymerases00:58

Eukaryotic RNA Polymerases

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6.4K
Eukaryotic Transcription Activators02:42

Eukaryotic Transcription Activators

11.1K
Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
11.1K
Eukaryotic Evolution01:24

Eukaryotic Evolution

34.7K
The endosymbiont theory is the most widely accepted theory of eukaryotic evolution; however, its progression is still somewhat debated. According to the nucleus-first hypothesis, the ancestral prokaryote first evolved a membrane to enclose DNA and form the nucleus. Conversely, the mitochondria-first hypothesis suggests that the nucleus was formed after endosymbiosis of mitochondria.
Contrary to the endosymbiont theory, the eukaryote-first hypothesis proposes that the simpler prokaryotic and...
34.7K

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相关实验视频

Updated: Jul 11, 2025

Using SCOPE to Identify Potential Regulatory Motifs in Coregulated Genes
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Using SCOPE to Identify Potential Regulatory Motifs in Coregulated Genes

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在ELM-eukaryotic线性动机资源-2024更新更新.

Manjeet Kumar1, Sushama Michael1, Jesús Alvarado-Valverde1,2

  • 1Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.

Nucleic acids research
|November 14, 2023
PubMed
概括

细胞线性基因 (ELM) 资源数据库已更新,增加了39个新的基因类和346个实例. 这一更新增强了生物医学研究人员对蛋白质调节和病原体相互作用的理解.

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An Integrated Approach for Microprotein Identification and Sequence Analysis
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科学领域:

  • * 分子生物学 * 分子生物学
  • * 生物信息学是一门学科.
  • * 结构生物学 * 结构生物学

背景情况:

  • * 短线性图案 (SLiM) 对于真核蛋白的功能和调节至关重要.
  • *SLiMs是丰富的,特别是在翻译后的修改,是病原体的目标.
  • *真核线性动机 (ELM) 资源提供了一个精心策划的SLiM数据库.

研究的目的:

  • * 报告ELM资源数据库的2024年更新.
  • * 以突出显示新注释的图案实例和类.
  • *将ELM数据与其他蛋白质资源 (如InterPro) 整合在一起.

主要方法:

  • *从科学文献中手动整理SLiM实例.
  • * 由一群熟练的注释者进行注释.
  • * 将数据与InterPro蛋白质模块资源集成.

主要成果:

  • *2024年ELM更新增加了39个新的图案类和346个新型图案实例.
  • * 数据库现在包含356个主题类和4283个实例,来自4274个出版物.
  • *包括700多个链接到实验确定的3D结构.

结论:

  • *更新的ELM资源扩展了SLiM功能在免疫和退化等领域的知识.
  • * 增强的数据有助于生物医学研究蛋白质调节和病原体模拟.
  • *与InterPro的集成增加了ELM数据的可发现性和实用性.