相关实验视频
Updated: Jul 11, 2025

06:59
Nanomanipulation of Single RNA Molecules by Optical Tweezers
Published on: August 20, 2014
14.9K
结合折叠的结构和动态机制和tRNA识别一个翻译T-盒子核糖开关的结构和动态机制
Xiaolin Niu1, Zhonghe Xu1, Yufan Zhang2
1Beijing Frontier Research Center for Biological Structure, School of Life Sciences, Tsinghua University, Beijing, 100084, China.
Nature communications
|November 15, 2023
概括
T盒子核糖转换器使用RNA-RNA相互作用来调节基因. 这项研究揭示了离子和tRNA结合如何协同驱动T盒受体折叠和功能.
科学领域:
- 分子生物学分子生物学
- 结构生物学 结构生物学
- 生物化学 生化学
背景情况:
- T-盒子核糖突变器通过两个结构化RNA之间的相互作用来调节基因表达.
- 驱动T盒折叠和功能结构转换的精确机制仍然不完全理解.
研究的目的:
- 为了阐明一个翻译T-box吸收体的折叠能量景观.
- 研究Mg2+和tRNA结合在T盒结构转换中的作用.
主要方法:
- 微角X射线散射 (SAXS) 是一种微角X射线散射技术.
- 单分子福斯特共振能量转移 (smFRET) 技术
- 计算建模计算建模
- 突变分析 突变分析
主要成果:
- 2+稳定了特定的RNA结构 (IIA/B干) 和它们的堆叠,促进了竞争对手前的构造.
- tRNA结合有助于RNA茎的最终对接,形成一个高亲和度的tRNA结合点.
- 突变分析证实了干IIA/B和干II中的S转变对功能的重要性.
结论:
- RNA-RNA相互作用和Mg2+协同控制T盒亚酶折叠和功能.
- 离子,内部和分子间相互作用的微妙平衡控制着T盒子核突开关的活动.
相关概念视频
Translational Regulation
25
Translational regulation in prokaryotes ensures efficient protein synthesis by controlling ribosome access to mRNA. This regulation is mediated by secondary RNA structures, including translational riboswitches, RNA thermometers, and small RNAs (sRNAs), which respond to intracellular and environmental signals to modulate gene expression.Translational RiboswitchesRiboswitches in the leader region of mRNAs can regulate translation by altering the accessibility of the Shine-Dalgarno (SD) sequence,...
25
RNA Structure
4.8K
The basic structure of RNA consists of a string of ribonucleotides attached by phosphodiester bonds. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
4.8K
Transcriptional Regulation: Riboswitches
40
Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
40
Riboswitches
8.1K
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
8.1K
Termination of Translation
25.4K
The large ribosomal subunit has several important structures essential to translation. These include the peptidyl transferase center (PTC) - which is the site where the peptide bond is formed - and a large, internal, water-filled tube through which the nascent polypeptide moves. This latter structure is called the Peptide Exit Tunnel, and it begins at the PTC and spans the body of the large ribosomal subunit. During translation, as the nascent polypeptide chain is synthesized, it passes through...
25.4K
Types of RNA
63.8K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
63.8K

