全基因组的转换揭示了密切相关的Bacillus物种之间广泛的交换
Mona Förster1, Isabel Rathmann1, Melih Yüksel1
1Institute for Biological Physics, University of Cologne, Zülpicherstr. 47a, 50674 Köln, Germany.
Nucleic acids research
|November 16, 2023
概括
细菌的转化促进了跨物种的基因转移. 密切相关的物种很容易交换核心基因,而遥远的物种显示出有限的,有针对性的基因替代,影响基因组动态.
科学领域:
- 微生物学 微生物学
- 遗传学 是一个遗传学.
- 进化生物学 进化生物学
背景情况:
- 水平基因转移 (HGT) 对细菌进化和适应至关重要.
- 限制全基因组,跨物种基因转移的因素在很大程度上是未知的.
研究的目的:
- 研究基因分歧对细菌基因转移动态的影响.
- 描述跨物种遗传物质交换的障碍和模式.
主要方法:
- 开发一个替代积累试验.
- 使用 Bacillus subtilis 作为接收者和各种 Bacillus 种类作为捐赠者.
- 基于核心基因组分离的基因替代率的定量.
主要成果:
- 正义替代率随着核心基因组分离的增加而呈指数级下降.
- 巴西细菌核心基因的高可访问性 (96%),可用Bacillus spizizenii等位基因替换.
- 在更遥远的物种 (Bacillus atrophaeus) 中的基因替代有利于高序列相同区域和核糖体基因.
- 正义替代有助于马赛克基因组模式,基因组架构重新排列和辅助基因动态.
结论:
- 跨物种基因转移主要是由核心基因的正统替换驱动的,特别是在密切相关的物种之间.
- 较远的相关物种之间发生了有限但显著的基因交换,影响了辅助基因含量和基因组结构.
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