推动细胞酶生产级联反应的边界 I:动力模型开发
Alexander Sigg1, Mario Klimacek1, Bernd Nidetzky1,2
1Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Graz, Austria.
Biotechnology and bioengineering
|November 20, 2023
概括
这项研究开发了一种动力模型,用于使用合的二糖化酸化酶高效的纤维素生产. 该模型准确地预测了转糖酶化效率,有助于工业碳水化合物生产.
科学领域:
- 生物催化和酶工程 生物催化和酶工程
- 碳水化合物化学 碳水化合物化学
- 工艺系统工程 工艺系统工程
背景情况:
- 使用结合的分糖酸酸酶的单级联反应提供了高效的转糖化途径.
- 从糖糖中生产纤维素对食品和料行业具有重大潜力.
- 了解动力学和热力学限制对于优化酶催化合成至关重要.
研究的目的:
- 开发和验证一种动力模型,通过合的糖和糖酸化酶来生产蜂菌.
- 评估模型在工业相关基质度的预测能力.
- 为优化合酶反应提供一个工程工具.
主要方法:
- 开发机械的初始速率模型,用于糖糖和纤维糖酸化酶反应.
- 纳入葡萄糖抑制术语,特别是细胞质酸化酶的双位点基质抑制.
- 包括质量作用项来解释反应平衡.
- 在一系列酶活性和基质度的实验数据上进行验证.
主要成果:
- 动力模型准确地描述了蜂菌的生产时间.
- 该模型成功地预测了可变酶活性和基质度的结果.
- 葡萄糖抑制,特别是双部位抑制,被确定为关键因素.
- 该模型考虑了亚微量化酸盐度和平衡效应.
结论:
- 建立了一个强大的动力模型,用于合的二糖化酸酶反应.
- 该模型是解开影响转换效率的因素的重要工具.
- 这项工作为计算用于纤维素生产过程优化的操作窗口提供了基础.
相关概念视频
ATP Energy Storage and Release
9.5K
ATP is a highly unstable molecule. Unless quickly used to perform work, ATP spontaneously dissociates into ADP and inorganic phosphate (Pi), and the free energy released during this process is lost as heat. The energy released by ATP hydrolysis is used to perform work inside the cell and depends on a strategy called energy coupling. Cells couple the exergonic reaction of ATP hydrolysis with endergonic reactions, allowing them to proceed.
One example of energy coupling using ATP involves a...
One example of energy coupling using ATP involves a...
9.5K
Glycolysis: Preparatory Phase
13.5K
In cellular metabolism (the complete breakdown of glucose to extract energy), glycolysis is the first step. Glycolysis takes place in the cytoplasm of both prokaryotic and eukaryotic cells. Glucose enters heterotrophic cells in two ways. One method is through secondary active transport, where the transport takes place against the glucose concentration gradient. The other mechanism uses a group of integral proteins called GLUT proteins, also known as glucose transporter proteins. These...
13.5K
ATP Synthase: Mechanism
14.7K
In animals, the mitochondrial F1F0 ATP synthase is the key protein that synthesizes ATP molecules through a complex catalytic mechanism. While the nuclear genome encodes the majority of ATP synthase subunits, the mitochondrial genome encodes some of the enzyme's most critical components. The formation of this multi-subunit enzyme is a complex multi-step process regulated at the level of transcription, translation, and assembly. Defects in one or more of these steps can result in decreased...
14.7K
Glycolysis: Pay-off Phase
9.9K
So far, glycolysis has cost the cell two ATP molecules and produced two small, three-carbon sugar molecules. These molecules will proceed through the second half of the pathway, and sufficient energy will be extracted to pay back the two ATP molecules used as an initial investment and produce a profit for the cell of two additional ATP molecules and two even higher-energy NADH molecules.
Step 1 - 5: Glycolysis Preparatory Phase
The first phase of glycolysis has 5 steps where the glucose is...
Step 1 - 5: Glycolysis Preparatory Phase
The first phase of glycolysis has 5 steps where the glucose is...
9.9K
Energy-requiring Steps of Glycolysis
163.6K
Glucose is the source of nearly all energy used by organisms. The first step of converting glucose into usable energy is called glycolysis. Glycolysis occurs in the cytosol of the cell over two phases: an energy-requiring phase and an energy-releasing phase. Over the first three steps, glucose is converted into different forms and attached to two phosphate groups donated by two ATP molecules, resulting in an unstable sugar. In the next two stages, the unstable sugar splits into two sugar...
163.6K
Coupled Reactions
7.7K
Cellular processes such as building and breaking down complex molecules occur through stepwise chemical reactions. Some of these chemical reactions are spontaneous and release energy, whereas others require energy to proceed. Cells often couple the energy-releasing reaction with the energy-requiring one to carry out important cell functions.
Energy in adenosine triphosphate or ATP molecules is easily accessible to do work. ATP powers the majority of energy-requiring cellular reactions....
Energy in adenosine triphosphate or ATP molecules is easily accessible to do work. ATP powers the majority of energy-requiring cellular reactions....
7.7K


