通过系统性扰动分析来确定细胞命运决定和转变中的关键调节相互作用
Qing Hu1, Min Luo2, Ruiqi Wang3
1Department of Mathematics, Shanghai University, Shanghai, 200444, China.
Journal of theoretical biology
|November 20, 2023
概括
本研究介绍了一个使用统计分析和分叉理论的框架,以了解调节相互作用如何驱动细胞命运过渡. 它确定了关键的反循环和干扰,这对于细胞命运决定至关重要.
科学领域:
- 系统生物学 系统生物学
- 计算生物学 计算生物学
- 细胞动力学细胞动力学
背景情况:
- 阐明细胞命运决定中的调节相互作用是一个重要的生物学挑战.
- 确定细胞命运过渡的合作机制仍然不完全理解.
研究的目的:
- 为确定细胞命运转变中的关键调节相互作用提出一个一般框架.
- 阐明反循环和干扰在细胞命运决定中的作用.
主要方法:
- 使用统计分析和分叉理论来建模细胞命运动态.
- 应用双参数分支分析来获得详细的机械洞察力.
- 采用综合方法来分析监管网络.
主要成果:
- 确定了触发分叉的特定反循环,使细胞命运过渡成为可能.
- 确定反循环中的监管相互作用决定了过渡方向.
- 通过表皮细胞到介质细胞过渡 (EMT) 网络证明了该方法的有效性,与实验数据保持一致.
结论:
- 拟议的框架有效地确定了细胞命运过渡中的关键调节相互作用和机制.
- 该方法为分析细胞生物学中复杂的调节网络提供了强大的方法.
- 这种方法可以广泛应用于各种细胞命运决策和过渡过程.
更多相关视频
相关概念视频
Interactions Between Signaling Pathways
6.3K
Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
6.3K
The Cell Cycle Control System
3.0K
The cell cycle regulation directs how a cell proceeds from one phase to the next and begins mitosis. The cell cycle control system includes intracellular regulatory molecules and external triggers. They provide "stop" or "advance" signals and operate at specific cell cycle stages termed checkpoints to ensure that a particular process is completed before the cell advances to the next phase.
Cyclins and cyclin-dependent kinases (Cdks) are the primary cell cycle regulators and...
Cyclins and cyclin-dependent kinases (Cdks) are the primary cell cycle regulators and...
3.0K
Negative Regulator Molecules
35.4K
Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
35.4K
Molecular Factors Affecting Cell Division
3.1K
Several external and internal factors influence the initiation and inhibition of cell division. For instance, the death of nearby cells or the release of human growth hormone (hGH) promotes cell division. In contrast, lack of hGH or crowding of cells can inhibit cell division.
Several proteins function as internal regulators to ensure each cell cycle stage is completed faithfully before proceeding to the next. Regulator molecules may act directly or influence the activity or production of other...
Several proteins function as internal regulators to ensure each cell cycle stage is completed faithfully before proceeding to the next. Regulator molecules may act directly or influence the activity or production of other...
3.1K
Diversity in Cell Signaling Responses
6.4K
The physiological function of a cell and cellular communication are outcomes of a range of extrinsic signals, intracellular signaling pathways, and cellular responses. No two cell types express the same repertoire of signaling components. Receptors are highly selective for their cognate ligands, but once activated, they can alter multiple cellular processes such as DNA transcription, protein synthesis, and metabolic activity.
Graded and Abrupt Responses
Some signaling systems generate...
Graded and Abrupt Responses
Some signaling systems generate...
6.4K
Cells Coordinate Growth and Proliferation
4.5K
Cell size is a significant factor impacting cellular design, function, and fitness. There exists some internal coordination by which cells double their masses before division, thus, achieving homeostasis. Coordination between cell growth and proliferation depends on the checkpoints in between cell cycle phases. Loss of coordination or failure in the checkpoint mechanism can drive the cell to uncontrolled growth and loss of cellular function. Like dividing cells that coordinate cellular growth,...
4.5K


