一个可转移的双指数潜力,用于小型分子的凝聚相模拟
Joshua T Horton1, Simon Boothroyd2, Pavan Kumar Behara3
1School of Natural and Environmental Sciences, Newcastle University Newcastle upon Tyne NE1 7RU UK daniel.cole@ncl.ac.uk.
一个新的框架,Smirnoff-plugins,允许定制的力场功能形式,改进分子建模. 这种双指数力场在凝缩相位属性预测中的性能优于伦纳德-斯电位.
科学领域:
- 计算化学计算化学
- 分子建模分子建模
- 物理化学 物理化学
背景情况:
- 列纳德-斯潜力是分子建模中非结合相互作用的遗留函数.
- 它的持久性是由于计算的局限性和重写软件和重新训练力场的高成本.
研究的目的:
- 介绍Smirnoff-plugins,这是扩展开放力场软件堆的灵活框架.
- 允许使用超出莱纳德-斯潜力的自定义力场功能形式.
- 训练和评估一个新的可转移的小分子力场.
主要方法:
- 开发了Smirnoff插件,以便在开放力场软件中允许自定义的功能形式.
- 利用自动化基础设施来训练基于双指数形式的新力场.
- 经过1000多个实验冷凝相性质的训练.
主要成果:
- 新的双指数力场展示了改进的转移自由能量.
- 达到可接受的形状能量,运行时间和收性质.
- 在关键指标上表现优于最先进的基于列纳德-斯的力场.
结论:
- 斯米诺夫插件提供了一个灵活的解决方案,用于将新型的功能形式纳入分子建模.
- 开发的双指数力场为莱纳德-斯潜能提供了一个有前途的替代方案.
- 这项工作有助于开发更准确,更有效的分子力场.
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