调节RBFOX2的EYA3异型与SIX4或ZBTB1合作,在肌体发生过程中控制转录
Hannah J Wiedner1,2, R Eric Blue1, Matheus Sadovsky1
1Department of Cell Biology and Physiology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
iScience
|November 29, 2023
概括
缺少同源3 (Eya3) 基因的眼睛的替代拼接对于肌肉细胞发育至关重要. 这项研究将SIX4和ZBTB1确定为关键的转录因子,并将RBFOX2确定为拼接调节器.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 发展生物学 发展生物学
背景情况:
- 替代拼接是一种广泛的基因调节机制,影响了超过95%的人类基因.
- 眼睛缺少同位素3 (Eya3) 基因在细胞增殖和分化中起作用.
研究的目的:
- 为了研究替代拼接在肌肉发育过程中的Eya3基因调节中的作用.
- 确定参与Eya3替代拼接的转录因子和拼接调节剂.
主要方法:
- 全基因组转录组分析 (RNA-seq).
- 基于质谱的蛋白质组学研究.
- 在Eya3基因中对替代拼接事件的分析.
主要成果:
- 确定了Eya3第7个外显子中保存的,特定于组织的替代拼接事件.
- Eya3对于肌细胞增殖和分化至关重要.
- 六个homeobox4 (SIX4) 和指和含有1 (ZBTB1) 的BTB域被确定为Eya3相互作用的转录因子.
- 确定RNA结合狐-1同源2 (RBFOX2) 是Eya3剪接的主要调节者.
- Eya3异型差异调节转录,使肌肉分化过程中的时间控制成为可能.
结论:
- Eya3的替代拼接有助于神经发生过程中的时间基因表达控制.
- Eya3 替代拼接和转录之间的相互作用对肌肉发育至关重要.
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