对与疾病相关的内解体外核酶PLD3和PLD4的结构和机制见解
Meng Yuan1,2, Linghang Peng3,2, Deli Huang3,2,4
1Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
bioRxiv : the preprint server for biology
|December 4, 2023
概括
结构分析了与自身免疫性疾病相关的脂酶D3和D4 (PLD3/4) 酶. 它们独特的催化和与疾病相关的突变揭示了治疗点.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 分子酶学 分子酶学
背景情况:
- 内分泌体外核酶脂酶D3 (PLD3) 和脂酶D4 (PLD4) 与自身炎症和自身免疫性疾病有关.
- 了解它们的酶机制和结构基础对于疾病洞察至关重要.
研究的目的:
- 阐明PLD3和PLD4的结构.
- 为了确定它们的催化活性的分子基础.
- 为了研究疾病相关突变的影响.
主要方法:
- 用X射线晶体学来确定不同状态 (apo,中间体,产物) 的酶结构.
- 生物化学试验分析酶活性,基质特异性和动力学.
- 野生类型和突变酶的结构分析.
主要成果:
- 揭示了一个链内二元拓,在PLD3和PLD4.4的接口上有一个基本活性位点.
- 通过两步的"链接和释放"机制,通过5'-酸化阻断了5'-to-3' ssDNA和ssRNA的消化.
- 发现了一种意想不到的酸酶活性,涉及到一种共价3'氏胺中间体.
- 在PLD4中鉴定出一种疏水性,影响基质结合和产品释放.
- 与疾病相关的突变体显示活动或热稳定性降低,解释了疾病联系.
结论:
- 对PLD3和PLD4的结构和机制见解为了解它们在疾病中的作用提供了基础.
- 这些发现为针对这些酶的治疗设计提供了潜在的途径.
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